Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1165 ATGAAGAACGATCGAATTTATATCGTGTACATGGGAGCTGCTACTTCATCAGAAGGCTCCTACAGATATGACCATGCCCAGATTCTGAGCTCTCTGTTGAAAAGGAAAGCAAATGCTCTGGTGCACAGCTACAGACATGGATTCTCCGGATTCGCGGCACATTTAACGGAGGAGGAGGCCCGCTCAATTGCTCAGAAACCTGGAGTGGTATCAGTATTTGAAGATCCTGTCTTGCAACTTCATACAACTCGTTCATGGGATTTCTTACACTACCAAACTGATCTAGAGACTGACTCCAAACCCGGTTCTGATGGTGACTCCCAATCTAGTGGACAAGCTGACACCATCATTGGCATCTTGGATACAGGAATTTGGCCTGAGTCTGAGAGCTTTAGCGACAAGACCATGGGCCCGGTTCCCTCGCGCTGGAGAGGGACATGCATGGAAAGCAATGATGTCGACTCCTTTAAATGCAACAGGAAGCTGATCGGAGCAAGGTATTACAACGACTCTGATGCTGCATCTGCAGTGCCTCACACGGCCAGGGACATGATCGGGCATGGTACACATGTGGCCTCAACTGCAGCTGGAAATTCTCTTCCAGACGTATCGTACTATGGCCTAGCTTCAGGGACCGCCAAGGGTGGATCGCCCGGCTCAAGGATCGCCATGTATAGAGTTTGTACGTTCTTTGGGTGTCGTGGATCATCTATTCTAGCTGCATTTGATGATGCAATTTCAGACGGGGTCGATGTGCTATCGCTGTCTCTAGGTTCATCAGCTGTGTTTGAGCTTGAATTCTCCACTGACCCAATTGCCATTGGAGCCTATCACGCCGTTGCGAAAGGGATCACGGTAGTGTGCTCCGCAGGCAATGACGGCCCCAGCCCTCAAACTGTAGTGAACATTGCTCCCTGGATTTTGACCGTGGGTGCCACCACCATTGACAGGGACTTCGAGTCTGATGTTGTTTTGGGAGGAAACAAAGTGATTAAGGGTGAAGGCATAAATTTTGCTAATATAAAAAAATCTCCAGCGTATCCATTGATATATGGCAGTTCAGCCAAGTCAAATTCCAGCAAGGTGGATGATGCAAGAAACTGTAAGCCAAATTCATTAGGTGAAGACAAGATCAAGGGGAGGATTGTTCTGTGTGACAATGATGACGGAGAATACACCCAGACAGAGAAGCTGGAGGAAGTGAAGCGCCTTGGAGGGGTTGGATTAATTTTGATTGAGGATGAAACAAGAGCAGTGGCTTCTAGATATGGAGCTTTTCCATTGACTGTCATCACTTCAAAGGATGCTTCAGAGATCCTATCCTATATCAATTCCACCAGGAACCCAGTCGCGACAATTCTAGCTACTGTATCAGTGGAACAATATAAACCAGCACCTGCTGTGGCCTACTTCTCATCCAGAGGTCCTTCGTATGCCACAAAGAACCTTCTCAAGCCTGATATTGCAGCACCAGGAGTGAACATTCTTGCAGCATGGATTGGCAATGACACAGCAGAGGCTCCGGCAGGGAAGGAGCCCCCACTATTCAATTTGCTCTCAGGAACTTCCATGGCATGCCCGCATGTTTCTGGAATAGCTGCTACAGTCAAATCCCAAAACCCCTCATGGAGCCCCTCTGCAATAAGATCGGCCATTATGACAACAGCAACTCAAAAGAACAATCTGAAAGCCCCAATAACCACACACTCAGGATCAGTAGCCACACCTTACGACTATGGTGCAGGGGAAGTAAGCCCATCTGGACCCTTACAGCCAGGGCTGGTTTATGAGACTGACACTGCTGACTACTTGCAATTTCTCTGCAACCATGGGTATGATATATCAAAAATAAAACTTATCTCACCAACTCTTCCTGATGGATTCACTTGCCCCAAGAACGCCAATGCTGATCTAATCTCCAATATGAATTATCCATCAATAGCCATCTCCAAATTCAACGGAAATGAGAGCAAGAAGGTAAGCAGAACTGTTACAAATGTTGGCAGTGATGATGAAACTCAGTATACTGTAAGCGTGAGTGCAGCTGCTGGCGTGGATGTGAAAGTGATACCTGATACATTGAAATTTACAAAGAATAGTAAGAAGCTGAGCTACCAAGTGATTTTTTCATCCAATGGATCTTCCTCGGTGAAGGGAGCTGTGTTTGGGTCAATTACCTGGACTAATGGCAAGCATAAAGTTAGGAGTCCGTTTGTTGTAAGCAGTGATTGA 2232 46.77 MKNDRIYIVYMGAATSSEGSYRYDHAQILSSLLKRKANALVHSYRHGFSGFAAHLTEEEARSIAQKPGVVSVFEDPVLQLHTTRSWDFLHYQTDLETDSKPGSDGDSQSSGQADTIIGILDTGIWPESESFSDKTMGPVPSRWRGTCMESNDVDSFKCNRKLIGARYYNDSDAASAVPHTARDMIGHGTHVASTAAGNSLPDVSYYGLASGTAKGGSPGSRIAMYRVCTFFGCRGSSILAAFDDAISDGVDVLSLSLGSSAVFELEFSTDPIAIGAYHAVAKGITVVCSAGNDGPSPQTVVNIAPWILTVGATTIDRDFESDVVLGGNKVIKGEGINFANIKKSPAYPLIYGSSAKSNSSKVDDARNCKPNSLGEDKIKGRIVLCDNDDGEYTQTEKLEEVKRLGGVGLILIEDETRAVASRYGAFPLTVITSKDASEILSYINSTRNPVATILATVSVEQYKPAPAVAYFSSRGPSYATKNLLKPDIAAPGVNILAAWIGNDTAEAPAGKEPPLFNLLSGTSMACPHVSGIAATVKSQNPSWSPSAIRSAIMTTATQKNNLKAPITTHSGSVATPYDYGAGEVSPSGPLQPGLVYETDTADYLQFLCNHGYDISKIKLISPTLPDGFTCPKNANADLISNMNYPSIAISKFNGNESKKVSRTVTNVGSDDETQYTVSVSAAAGVDVKVIPDTLKFTKNSKKLSYQVIFSSNGSSSVKGAVFGSITWTNGKHKVRSPFVVSSD* 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 12908877 12912473 - Vvi18g1165 Vvi18g1165 780868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1165 743 Gene3D - 607 742 - -
Vvi18g1165 743 PRINTS Subtilisin serine protease family (S8) signature 112 131 IPR015500 -
Vvi18g1165 743 PRINTS Subtilisin serine protease family (S8) signature 183 196 IPR015500 -
Vvi18g1165 743 PRINTS Subtilisin serine protease family (S8) signature 520 536 IPR015500 -
Vvi18g1165 743 CDD PA_subtilisin_like 322 453 - -
Vvi18g1165 743 Pfam Peptidase inhibitor I9 7 81 IPR010259 -
Vvi18g1165 743 SUPERFAMILY Subtilisin-like 108 593 IPR036852 GO:0004252|GO:0006508
Vvi18g1165 743 Gene3D Peptidase S8/S53 domain 114 603 IPR036852 GO:0004252|GO:0006508
Vvi18g1165 743 ProSiteProfiles Serine proteases, subtilase domain profile. 85 590 - -
Vvi18g1165 743 Gene3D - 316 460 - -
Vvi18g1165 743 ProSitePatterns Serine proteases, subtilase family, histidine active site. 187 197 IPR022398 -
Vvi18g1165 743 Pfam Subtilase family 114 562 IPR000209 GO:0006508|GO:0008236
Vvi18g1165 743 PANTHER CO(2)-RESPONSE SECRETED PROTEASE 26 740 - -
Vvi18g1165 743 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 740 IPR045051 -
Vvi18g1165 743 Pfam Fibronectin type-III domain 641 740 IPR041469 -
Vvi18g1165 743 ProSitePatterns Serine proteases, subtilase family, serine active site. 521 531 IPR023828 -
Vvi18g1165 743 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 81 IPR037045 -
Vvi18g1165 743 CDD Peptidases_S8_3 78 557 IPR034197 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1165 K25898 - vvi:100257482 1453.34