Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1308 ATGGCAGCTATGCAACACTCTCCGGTCACGTTCCAGTCCAGATCCCCACCATCGGCGGCCAAAAGCCTATCGAACAAGCCGCTGAACCTCTCATTCTCTGGCAACTTCCCCTCCTTCAGGCTGACCAACAAAGTTGCTGGGAAATCTCGATCCGGCGCCTCCTCCGCTAGAATGTCCGCCACCGCTGCCGGAAGCTACGCAACCGCCCTCGCCGACGTCGCGAAGTCCAACGGAACCCTAGACACCACCGCGGAAGACGTTGAGAAAATTGAAAAAGTCTTGTCCGATGAACAGGTACTGGGTTTCTTCTGCAACCCTACGATTGATATCGAGAAGAAACGCAACGTTTTGGACGAGATAGCGAAGACATCGGGCATCCAACCACACACCATGAACTTCCTGAACATCCTGGTGGACATGAAGCGAATCGATTTGATAAAAGAGATAGCGAAGGAGTTCGAATTGGTGTACAACCGGCTGACGGATACGGACTTGAGGAAATTGCTGCTGAGCTGGAGTTGGGGAATATTCAACTGGTTTGATTTCATCGCTTTTTCAAAACAAAAACATGTTTTGAATTAA 582 50.34 MAAMQHSPVTFQSRSPPSAAKSLSNKPLNLSFSGNFPSFRLTNKVAGKSRSGASSARMSATAAGSYATALADVAKSNGTLDTTAEDVEKIEKVLSDEQVLGFFCNPTIDIEKKRNVLDEIAKTSGIQPHTMNFLNILVDMKRIDLIKEIAKEFELVYNRLTDTDLRKLLLSWSWGIFNWFDFIAFSKQKHVLN* 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 18213106 18223429 - Vvi18g1308 Vvi18g1308 781011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1308 193 MobiDBLite consensus disorder prediction 1 24 - -
Vvi18g1308 193 PANTHER BNACNNG66500D PROTEIN 48 166 - -
Vvi18g1308 193 Pfam ATP synthase delta (OSCP) subunit 63 159 IPR000711 GO:0015986|GO:0046933
Vvi18g1308 193 PANTHER ATP SYNTHASE DELTA CHAIN 48 166 IPR000711 GO:0015986|GO:0046933
Vvi18g1308 193 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 59 161 IPR026015 -
Vvi18g1308 193 Gene3D - 62 154 IPR026015 -
Vvi18g1308 193 PRINTS ATP synthase delta subunit signature 62 81 IPR000711 GO:0015986|GO:0046933
Vvi18g1308 193 PRINTS ATP synthase delta subunit signature 131 142 IPR000711 GO:0015986|GO:0046933
Vvi18g1308 193 PRINTS ATP synthase delta subunit signature 142 156 IPR000711 GO:0015986|GO:0046933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1308 K02113 - vvi:100251062 282.722