Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1331 ATGGGTCATCCGATGCCGGCAGTGAGCGCGAAGAGCACTCCAACATTTCCGCCTGATGTTCTGAAGTGTAGTTCTCAAAGGGAGCAAAAGAAGTCGTTTAAAGAAGACAAGCCATTCAGTTTTTTACATGTTTTCTGGGAGGGTCTTGTAGCTGGAGGTATTGCTGGTGTTGTTGTTGAAGCAGCTTTATATCCAATTGATACAATAAAAACTAGACTTCAGGCTGCTCATGGTGGAGGAAAAATTGTATTGAAGGGTCTCTATTCTGGATTGGCAGGAAATCTTGCTGGTGTCTTACCGGCCTCTGCGATATTTGTTGGTGTATATGAACCTACAAAGCAGAAACTGCTGAAGACCATCCCTGAAAACCTTAGTGCTTTTGCTCATTTGACTGCAGGTGCTGTTGGCGGGGCTGCATCTTCTCTTGTTCGTGTGCCAACAGAGGTTGTTAAGCAAAGAATGCAGACTGGGCAATTTGCTTCTGCAACTGATGCTGTTCAACTTATTGTTGCCAAGGAGGGGTTTAAAGGTCTCTATGCGGGATATGGATCCTTTTTATTGCGAGATTTACCTTTTGATGCTCTCCAGTTTTGCATCTATGAGCAGCTACGGATAGGGTATAAGCTAGCGGCACAGAGGGACTTGAATGATCCTGAGAATGCTATGATTGGTGCTTTTTCTGGTGCAATAACAGGAGCTATAACTACTCCTCTTGATGTGATAAAGACTAGATTAATGGTTCAGGGATCTGCAAACCAGTACAAAGGGATTTTTGACTGTGTTAGGACTGTCATAAGAGAAGAAGGAACTCCTGCTCTTTTCAAGGGTATCGGGCCAAGAGTACTCTGGATAGGTATTGGAGGTTCAATTTTCTTTGTCATTCTTGAAAGGACAAAGCAGGTGGTTGCCCAAACGCACACTAGGACTGAGAAGAAGACATGGAGTAGATTCCTTCTGAAAGCCATTTTTTGGGTCCTGTTGTGTTTGGATTACACCTGGAATCAATATGAATATTGA 1017 43.46 MGHPMPAVSAKSTPTFPPDVLKCSSQREQKKSFKEDKPFSFLHVFWEGLVAGGIAGVVVEAALYPIDTIKTRLQAAHGGGKIVLKGLYSGLAGNLAGVLPASAIFVGVYEPTKQKLLKTIPENLSAFAHLTAGAVGGAASSLVRVPTEVVKQRMQTGQFASATDAVQLIVAKEGFKGLYAGYGSFLLRDLPFDALQFCIYEQLRIGYKLAAQRDLNDPENAMIGAFSGAITGAITTPLDVIKTRLMVQGSANQYKGIFDCVRTVIREEGTPALFKGIGPRVLWIGIGGSIFFVILERTKQVVAQTHTRTEKKTWSRFLLKAIFWVLLCLDYTWNQYEY* 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 18987561 19001786 - Vvi18g1331 Vvi18g1331 781034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1331 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 206 IPR018108 -
Vvi18g1331 338 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 32 312 - -
Vvi18g1331 338 Pfam Mitochondrial carrier protein 124 204 IPR018108 -
Vvi18g1331 338 Pfam Mitochondrial carrier protein 219 303 IPR018108 -
Vvi18g1331 338 Pfam Mitochondrial carrier protein 45 118 IPR018108 -
Vvi18g1331 338 MobiDBLite consensus disorder prediction 1 21 - -
Vvi18g1331 338 Gene3D Mitochondrial carrier domain 48 317 IPR023395 -
Vvi18g1331 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 115 IPR018108 -
Vvi18g1331 338 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 32 312 - -
Vvi18g1331 338 PRINTS Mitochondrial carrier protein signature 129 142 IPR002067 GO:0055085
Vvi18g1331 338 PRINTS Mitochondrial carrier protein signature 142 156 IPR002067 GO:0055085
Vvi18g1331 338 PRINTS Mitochondrial carrier protein signature 181 201 IPR002067 GO:0055085
Vvi18g1331 338 PRINTS Mitochondrial carrier protein signature 230 248 IPR002067 GO:0055085
Vvi18g1331 338 PRINTS Mitochondrial carrier protein signature 274 292 IPR002067 GO:0055085
Vvi18g1331 338 SUPERFAMILY Mitochondrial carrier 45 296 IPR023395 -
Vvi18g1331 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 301 IPR018108 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g1175 Vvi18g1331 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1331 K15111 - vvi:100261204 658.677