Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1356 ATGAGATTGATTTTAGAGGAGGGTAGATCTACTTTAAGAACAATGCTGAAAACCCGGCCAAAAAGTAATGGTTTCCCAATCCATTTTTCAAACTGGAAGCTTACTACTGCCCAAGCAAAGAGACTCCATTTAGCAAGGAGGACTAGACCTCCACACCTTGAACTAATAACAATGGCCGGAGTGAAGCTACTGGGATTCTGGGCAAGCCCTTTTAGTCACAGAGTAATATGGGCTCTAAAACTGAAGGGCGTGAGCTATGAGTATATAGAAGAAGACCTATCCAACAAGAGCCAATTGCTGATACATAACAACCCAGCTGATAAGCAGATCCCTGTGCTTATTCATGGTGACAAAGCAGTCGCAGAGTCTCTTGTTATCCTTGAATACATCGATGAAACCTGGCCACACAATCCATTGCTGCCAAAAGGGGCTTATGAGAGAGCAACAGCCCGGTTTTGGATCAAATTTGCAGTAGAAAAGGGTGCCACTTTCTACGCATTCTATAACTCCAATACTGGAGAAGAACAAGAGAAAGCTACAAAAGAAACCGTGGAAGTGCTGAAAATCATTGAAGAAGAAGCCCTTGGGGATGAGAAGTTTTTCGGGGGTGAGGATATAGGATTGTTAGACCTGGTGTTGGGATGGTTTGCTCACTGGTTTGATATCATAGAAGAACTGGTGGGTGTGAAAGTGCTGGACGCCTCCAAATTGCCCCGCCTGCATGCATGGACTGAGAATTTTAAGGAAGTTCCTGTGATCAAAGAAAATCTTCCTGATCGCAGCAAACTCTTGGCCTACTTCAAACACAAGTATTTTGCCCACCTTCCAAGTCTAGACAATTAG 843 43.89 MRLILEEGRSTLRTMLKTRPKSNGFPIHFSNWKLTTAQAKRLHLARRTRPPHLELITMAGVKLLGFWASPFSHRVIWALKLKGVSYEYIEEDLSNKSQLLIHNNPADKQIPVLIHGDKAVAESLVILEYIDETWPHNPLLPKGAYERATARFWIKFAVEKGATFYAFYNSNTGEEQEKATKETVEVLKIIEEEALGDEKFFGGEDIGLLDLVLGWFAHWFDIIEELVGVKVLDASKLPRLHAWTENFKEVPVIKENLPDRSKLLAYFKHKYFAHLPSLDN* 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 19496009 19497154 - Vvi18g1356 Vvi18g1356 781059

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1356 280 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 143 272 IPR010987 -
Vvi18g1356 280 PANTHER GLUTATHIONE TRANSFERASE GST 23-LIKE 58 272 - -
Vvi18g1356 280 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 58 272 IPR045073 -
Vvi18g1356 280 SUPERFAMILY GST C-terminal domain-like 132 269 IPR036282 -
Vvi18g1356 280 SUPERFAMILY Thioredoxin-like 61 157 IPR036249 -
Vvi18g1356 280 Gene3D Glutaredoxin 57 142 - -
Vvi18g1356 280 Pfam Glutathione S-transferase, N-terminal domain 61 132 IPR004045 -
Vvi18g1356 280 CDD GST_C_Tau 144 268 IPR045074 GO:0004364|GO:0006749
Vvi18g1356 280 CDD GST_N_Tau 61 134 - -
Vvi18g1356 280 Gene3D - 143 275 - -
Vvi18g1356 280 SFLD Glutathione Transferase (cytosolic) 58 270 IPR040079 -
Vvi18g1356 280 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 59 138 IPR004045 -
Vvi18g1356 280 SFLD Main.3: Omega- and Tau-like 58 270 IPR045073 -
Vvi18g1356 280 Pfam Glutathione S-transferase, C-terminal domain 178 245 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1356 K00799 GST, gst; glutathione S-transferase [EC:2.5.1.18] - vvi:100253876 458.373
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1356 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo18g00153 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000433 1 5 2 3 1 5 3 5 5 4 2 4 4 7 7 4 4 1 5 4 3 3 3 5 6 6 2 5 5 6 120