Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1437 ATGCTGTTGAAGTCCGTTAACACCTTGGCTATTGCAACAATGCTGGGTTTTGCATTCCTTATCCTCCTCTTCTTCAGCTCCTTCCAATACCCATCTGCATCCACTTCTATACCATCCCTTAACATGTCCACTTTCCTGAATCATCACACTTCTGACCCCTTCAGGGACCTCTTGGGGGCATTCAAGAAGTGGGACTCTCAAGTGGGTTGTTCCAGCTTCAGAGAAACCCACAAGGGATTGATAAAAAATGGGTCTTCTTCTTTGCAAGACGTTGATGGTGATCTGGACTGCGGGGTGCTGCAGATGCGTCATGTTGAGATTTTGGTTAAAGGGTGGACTTGGATTCCTGATAATTTGGATAATCTGTACTCATGCCGATGTGGGTTGAGCTGTTTGTGGACCAAGTCTTCGGTTCTTGCTGACAAGCCTGATGCTTTGTTGTTTGAGACCACCACTCCTCCACTTCAGAGACGCAATGGAGATCCACTTCGAGTATACATGGATCTTGAGGCGGGTAGGAAGAGGTCAGGAGTCGAGGATATATTTATTAGCTATCATGCCAAAGATGATGTACAGTCCACCTATGCTGGTGCACTCTTTCATAATAATCGAAATTATCATGTCTCTTCTTATAAAAACAATGATACCCTTGTATACTGGTCTTCATCACGGTGTCTTTCTCAAAGGAACCAGCTTGCCAAGAATCTACTCCGCTTGCTGCCTCACCACTCATTTGGCAAGTGCTTGAATAATGTTGGTGGCCTAGACATGGCACTTTCCCTCTACCCCGAGTGTGCCAATAATGCCATTGAAGCCCCCAAATGGTGGGACCATCTACATTGTGCCATGTCTCACTACAAGTTTGTCCTTGCAATTGAGAACACCATGACCGAGAGTTATGTGACTGAGAAGCTATTTTATGCTCTAGACTCTGGTGCTATTCCCATCTACTTTGGAGCCCCAAATGTTTTAGATTTTGTCCCACCACATTCTATAATAGATGGGACTAAGTTCAGGTCCATCGAGGAATTGGCTGCTTATGTGAAGGCCCTTGCTAATGACCCTGTTGCCTATGCGGAGTACCATGCATGGAGGAGATGTGGGGTGCTGGGTAACTATGGAAAGACCCGTGCGGCAAGCCTGGACACATTACCTTGCCGGTTGTGCGAATTTGTGAGCAGAAAAGGTGGGAGAAATGCTAGAGCCTTGTGA 1212 46.29 MLLKSVNTLAIATMLGFAFLILLFFSSFQYPSASTSIPSLNMSTFLNHHTSDPFRDLLGAFKKWDSQVGCSSFRETHKGLIKNGSSSLQDVDGDLDCGVLQMRHVEILVKGWTWIPDNLDNLYSCRCGLSCLWTKSSVLADKPDALLFETTTPPLQRRNGDPLRVYMDLEAGRKRSGVEDIFISYHAKDDVQSTYAGALFHNNRNYHVSSYKNNDTLVYWSSSRCLSQRNQLAKNLLRLLPHHSFGKCLNNVGGLDMALSLYPECANNAIEAPKWWDHLHCAMSHYKFVLAIENTMTESYVTEKLFYALDSGAIPIYFGAPNVLDFVPPHSIIDGTKFRSIEELAAYVKALANDPVAYAEYHAWRRCGVLGNYGKTRAASLDTLPCRLCEFVSRKGGRNARAL* 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 21252632 21263505 - Vvi18g1437 Vvi18g1437 781140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1437 403 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 14 402 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vvi18g1437 403 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 101 395 - -
Vvi18g1437 403 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 213 395 IPR001503 GO:0006486|GO:0008417|GO:0016020
Vvi18g1437 403 Gene3D - 165 369 IPR038577 -
Vvi18g1437 403 PANTHER ALPHA-(1,4)-FUCOSYLTRANSFERASE 14 402 - -
Vvi18g1437 403 PIRSF FucT_plant 1 403 IPR017177 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1437 K14412 - vvi:100256631 828.165