Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g1566 | ATGGATGGAAATGGTACCCTCTTTGGCACATTAAGTGGGAACACCAGGGAGGTGCTTCACAAATTTACTGTTGACCTTCCAAAAAAGCATGGAAGAGGTGGCCAGTCGGCTCTTCGATTTGCTCGTCTTCGAATGGAGAAGCGGCACAACTATGTGAGGAAAACTGCAGAGCTTGCCACCCAGTTTTTTATCAATCCTGCCACCAGCCAGCCCAATGTTTCAGGGTTGATACTTGCTGGTTCCGCTGACTTCAAAACTGAGCTGAGTCAGTCTGACATGTTTGATCCCCGTCTTCAGGCCAAAATACTGAATGTGGTTGATGTTTCTTATGGAGGTGAAAATGGTTTCAATCAGGCAATAGAGTTGTCATCTGAGATCCTATCCAATGTGAAGTTCATTCAGGAGAAGCGCTTGATAGGGAAATATTTTGAGGAGATCAGCCAGGATACTGGGAAGTATGTCTTTGGCGTTGATGACACACTGAAAGCTTTGGAGATGGGTGCTGTTGAGACCCTGATTGTGTGGGAAAATCTTGACATTAGTAGGTATGAAAAGATGTCACTGCTAGAGTGGAATTCTTCGTTACCAGCTGGATATGAGGGGGGAATGGGATCAAAAGCCTGCACTGGTGCGCGAGATCTCGGGCTTATTGCAGCTGCTCCCGTGATGATGCCTGAAAATTTTCATGGAGAATTAATCAAGTTTGGATTGTCTGGATGCAAGAACACATCAATAGCTTGTAACACATTGCTGGGAGGGGGTTGCGTTGAAGCTTTCGTTTGTTTTCATCAGCATGGTGGTTGA | 804 | 45.65 | MDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDISRYEKMSLLEWNSSLPAGYEGGMGSKACTGARDLGLIAAAPVMMPENFHGELIKFGLSGCKNTSIACNTLLGGGCVEAFVCFHQHGG* | 268 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 18 | 25255969 | 25258403 | - | Vvi18g1566 | Vvi18g1566 | 781269 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g1566 | 267 | Pfam | eRF1 domain 2 | 1 | 128 | IPR005141 | - | |
| Vvi18g1566 | 267 | Gene3D | - | 130 | 189 | IPR029064 | - | |
| Vvi18g1566 | 267 | PANTHER | PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 | 1 | 185 | IPR004403 | GO:0003747|GO:0006415 | |
| Vvi18g1566 | 267 | SUPERFAMILY | L30e-like | 129 | 185 | IPR029064 | - | |
| Vvi18g1566 | 267 | Pfam | eRF1 domain 3 | 132 | 184 | IPR005142 | - | |
| Vvi18g1566 | 267 | SUPERFAMILY | Translational machinery components | 1 | 127 | - | - | |
| Vvi18g1566 | 267 | Gene3D | eRF1 domain 2 | 1 | 128 | IPR042226 | - | |
| Vvi18g1566 | 267 | PANTHER | EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-2 | 1 | 185 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi18g1566 | K03265 | - | vvi:100242471 | 362.844 |