Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1591 ATGGACGAGGTGGGTGAGGAAGCAAAGCAGGTTTCTTATAAGGTTGTGAGGGATGAAAATGGGAATGTTAAGTTGGAGTGTCCGGTTCTTGCTAAGCTGTTCGCGGCTGAGGAAATTTCTGCACAGGTTTTGAGAAAGCTTGCTGATGATGCTTCAAAGTTTTTGAATGATAAAGTTACCAAAGCTGTGGTTACGGTGCCAGCATATTTTAATGATTCTCAAAGGACAGCAACAAAAGATGCAGGTCGTATTGCTGGTCTAGAAGTCCTTCGGATCATAAATGAACCTACTGCAGCTTCACTGGCATATGGTTTTGAAAAGAAGAATAATGAAACAATTCTTGTATTTGATCTTGGAGGTGGTACATTTGATGTTTCAGTGCTTGAGGTTGGAGATGGAGTGTTTGAGGTGCTTTCTACCTCAGGTGATACACATTTGGGAGGTGATGACTTTGACAAGAGAATTGTTGATTGGCTAGCACAAAACTTTAAGAGAGATGAAGGTATAGATCTTCTAAAAGACAAGCAAGCTCTTCAGCGGCTCACAGAGACTGCCGAGAAAGCAAAGATTGAGCTTTCATCTTTAACTCAGACTAATATTAGTTTACCATTCATTACTGCCACTTCCGAAGGGCCTAAACACATTGAAACCACCCTTACAAGAGCCAAGTTTGAAGAATTATGTTCAGACTTGCTAGACCGGCTGCGTACACCTGTTGAAACTGCATTGAGGGATGCAAAACTCTCTTTCAAAGATTTGGATGAAGTTATCCTTGTTGGTGGTTCAACGCGTATCCCAGCTGTTCAGGATCTTGTAAGGAAGATGACTGGAAAAGAACCCAATGTTACAGTTAATCCTGATGAAGTTGTTGCACTTGGTGCTGCGGTTCAGGCTGGTGTTTTAGCTGGAGATGTTAGTAACATTGTGCTATTGGATGTGACACCATTGTCTCTGGGTTTGGAAACCCTGGGTGGTGTCATGACAAAGATCATACCAAGGAACACAACTTTACCAACTTCCAAATCTGAGGTTTTCTCTACGGCAGCAGATGGGCAAACCAGTGTTGAGATCAATGTCCTCCAGGGTGAGAGAGAGTTTGTGAGGGACAACAAATCTCTGGGTAGCTTCCGTTTGGATGGGATTCCTCCAGCTCCCCGTGGAGTTCCCCAGATTGAAGTCAAATTTGATATTGATGCCAATGGTATCCTTTCAGTCACGGCAGTTGACAAGGGAACTGGAAAGAAGCAGGACATCACCATAACTGGTGCTAGCACCTTACCCAATGACGAGGTGGATAGAATGGTGAAAGAAGCTGAAAAATTTGCAAAGGAGGACAAGGAGAAGAGGGATGCAATAGACACAAAGAACCAGGCTGATTCTGTTGTGTACCAAACTGAAAAGCAGCTAAAAGAACTGGGAGACAAAGTACCTGCTCCAGTCAAGGGCAAGGTGGAGGCTAAACTAAAGGAGCTCAAGGATGCCATCTCCAGTGGGTCAACAACCCAAACTATCAAGGACGCAATGGCTGCACTGAACCAAGAGGTCATGCAGATAGGGCAATCTCTCTACAGCCAGGCTGGTGCACCTGGTGCTGGGGCTGGAGCTGGAGCGGCTGGATCAACTGACAGCAAACCTGATGGAGATGTTATCGATGCAGACTTCACCGAGAGCAAGTGA 1677 44.9 MDEVGEEAKQVSYKVVRDENGNVKLECPVLAKLFAAEEISAQVLRKLADDASKFLNDKVTKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFEKKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLAQNFKRDEGIDLLKDKQALQRLTETAEKAKIELSSLTQTNISLPFITATSEGPKHIETTLTRAKFEELCSDLLDRLRTPVETALRDAKLSFKDLDEVILVGGSTRIPAVQDLVRKMTGKEPNVTVNPDEVVALGAAVQAGVLAGDVSNIVLLDVTPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVTAVDKGTGKKQDITITGASTLPNDEVDRMVKEAEKFAKEDKEKRDAIDTKNQADSVVYQTEKQLKELGDKVPAPVKGKVEAKLKELKDAISSGSTTQTIKDAMAALNQEVMQIGQSLYSQAGAPGAGAGAGAAGSTDSKPDGDVIDADFTESK* 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 25847095 25853527 + Vvi18g1591 Vvi18g1591 781294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1591 558 SUPERFAMILY Actin-like ATPase domain 110 301 IPR043129 -
Vvi18g1591 558 Pfam Hsp70 protein 3 523 IPR013126 GO:0005524|GO:0140662
Vvi18g1591 558 PRINTS 70kDa heat shock protein signature 62 82 - -
Vvi18g1591 558 PRINTS 70kDa heat shock protein signature 121 131 - -
Vvi18g1591 558 PRINTS 70kDa heat shock protein signature 253 269 - -
Vvi18g1591 558 PRINTS 70kDa heat shock protein signature 284 304 - -
Vvi18g1591 558 PRINTS 70kDa heat shock protein signature 307 326 - -
Vvi18g1591 558 PRINTS 70kDa heat shock protein signature 388 404 - -
Vvi18g1591 558 Gene3D Actin; Chain A, domain 4 147 234 - -
Vvi18g1591 558 MobiDBLite consensus disorder prediction 525 558 - -
Vvi18g1591 558 PANTHER HEAT SHOCK PROTEIN 70KDA 1 533 IPR013126 GO:0005524|GO:0140662
Vvi18g1591 558 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 300 424 IPR029047 -
Vvi18g1591 558 SUPERFAMILY Actin-like ATPase domain 7 107 IPR043129 -
Vvi18g1591 558 Coils Coil 171 198 - -
Vvi18g1591 558 Gene3D - 426 526 IPR029048 -
Vvi18g1591 558 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 303 459 IPR029047 -
Vvi18g1591 558 ProSitePatterns Heat shock hsp70 proteins family signature 2. 115 128 IPR018181 -
Vvi18g1591 558 Gene3D - 108 281 - -
Vvi18g1591 558 PANTHER 70 KDA HEAT SHOCK PROTEIN 1 533 - -
Vvi18g1591 558 ProSitePatterns Heat shock hsp70 proteins family signature 3. 256 270 IPR018181 -
Vvi18g1591 558 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 453 531 IPR029048 -
Vvi18g1591 558 Gene3D - 43 298 - -
Vvi18g1591 558 Gene3D - 3 42 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1591 K03283 - vvi:100248235 1032.71