Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1633 ATGGATCTCTTCTTATACCTAATTTACTTCATACTCTTCTCTGTATCTCTTAATGAACAAAGTACTCCCCCCAAAGTATTTCGGACCTCCTTGATGGGAGAGAACATGGCTGTGATGTGTGGGGCTTCAGGGAACAAGTTCCTATTCTCCAACGAGGACAAGCTTGTTACCTCATGGTGGCCAAACTTGATCAAGAAGATTTTGTACTTCCCTTCTCTTTTAAATGACGCCTCAACAAGAGATCTGACCAAACCTCACAGAGCTCTTCTTCAATTTCTCAAGCAGTATGTGGAGATCATGGATTTGATGGCACACAAGCACATAGACATGGACTGGGCTCCTAATAAAAAAGTCAAGGTTTATCTGCTTTCAAAGAAGTATACCTTTGCGTTGTCTTGTCGGTTGTTTCTAAAGATTGAAGATTCTGAATGGGTTGCTAGGATTTCCAATGACTTCGATCATATTATGGCAGGGTTCATTTCTTTGCCTATAGATATTCCTGGTACAACATTCAACCGTGCTATCAAAGCAAAAAACATCCTTCACAAAGAGCTCATAGAAATAATCAAAAAGAGAAAGAAGGAATTAACAGAGAAGAGAGATTTAGCAGCTCAAGATCTACTATCCCACATGCTACTTGTGCCAGATGAGAATGGTAAGGTTCTGAATGAAATGGAGATTAGTACTTACATTCTTGGTGTACTCTTAGCTAGCCATGAAACCACAAGCACTGCTATCACATTTGTCCTCAAGTATCTTTCAGAGTTTCCAGATGTCTATGATGCAGTCTTGAAAGAGCAAATGGAGATTGCAAAGTCCAAAGGTCCAGAAGAGTTTCTCAACTGGAATGACATTCAGAATATGAAGCATTCATGGAATGTGGCGAGGGAGTCAATGAGGCTATCACCACCGGGTATAGGAGGTTTCAGAGAAGCCTTAACTGACTTCACTTATGAAGGTTTTACAGTTCCAAAAGGATGGAAGACACATTGGACTGTGCATTCAACGCACAAGAATCCCGAGTACTTTCCAGATCCGGAAAAGTTTGATCCCTCAAGATTTGAAGGAGAGGGGCCTGTACCATACACTTTCGTACCTTTTGGGGGAGGACCTCATATGTGCCATGGGAAAGAGTATGCTCGACTAGAACTACTTGTGTTCATGTACAATGTGGTGTCAAGATTCAAATTGGAGAAAGTAGTTCCGAACGAAAAGATCACATATAACCCCTCACCCATTCCTGCAAATGGTCTCCCAATGCGCCTCCAGCCTCATAAAATTTCTAAGCTGATCCTTTTATTTTATTTTATTTCGAATATGTTTTTTTTAAGGTGTGGAAATGAATTTGGTATACATATGTCCAGTTTAAACTCGAACTTGAATCTAACATTATGGTTTCTGTGCAAGCTTATCTCTGATAATTTGATTATTCATGTGCATATCATCCAATTTCACTTCAGTTGTTTTCCAAAGGCACGCAACAAGGAAAAATGCATCTCTAGTGGCAGCCAAGAGTCGAAGAAACATCATCTTCTTGCATCAAAGTGTCCACTTGTTGATGATGTTCTTGTCTTTTTGGAGTTGGAGATAAACCCAACACGTAATTTAGTTCAAATTTTGCGGATTCTTGGTTCATCGAAAAGTATTCCTGGAACACGTGCATGA 1665 40.0 MDLFLYLIYFILFSVSLNEQSTPPKVFRTSLMGENMAVMCGASGNKFLFSNEDKLVTSWWPNLIKKILYFPSLLNDASTRDLTKPHRALLQFLKQYVEIMDLMAHKHIDMDWAPNKKVKVYLLSKKYTFALSCRLFLKIEDSEWVARISNDFDHIMAGFISLPIDIPGTTFNRAIKAKNILHKELIEIIKKRKKELTEKRDLAAQDLLSHMLLVPDENGKVLNEMEISTYILGVLLASHETTSTAITFVLKYLSEFPDVYDAVLKEQMEIAKSKGPEEFLNWNDIQNMKHSWNVARESMRLSPPGIGGFREALTDFTYEGFTVPKGWKTHWTVHSTHKNPEYFPDPEKFDPSRFEGEGPVPYTFVPFGGGPHMCHGKEYARLELLVFMYNVVSRFKLEKVVPNEKITYNPSPIPANGLPMRLQPHKISKLILLFYFISNMFFLRCGNEFGIHMSSLNSNLNLTLWFLCKLISDNLIIHVHIIQFHFSCFPKARNKEKCISSGSQESKKHHLLASKCPLVDDVLVFLELEINPTRNLVQILRILGSSKSIPGTRA* 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 26756040 26758590 - Vvi18g1633 Vvi18g1633 781336

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1633 554 PANTHER CYTOCHROME P450 26 24 422 - -
Vvi18g1633 554 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 24 422 - -
Vvi18g1633 554 Pfam Cytochrome P450 25 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1633 554 PRINTS P450 superfamily signature 237 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1633 554 PRINTS P450 superfamily signature 293 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1633 554 PRINTS P450 superfamily signature 365 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1633 554 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1633 554 SUPERFAMILY Cytochrome P450 24 424 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1633 554 Coils Coil 186 206 - -
Vvi18g1633 554 PRINTS E-class P450 group I signature 226 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1633 554 PRINTS E-class P450 group I signature 246 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1633 554 PRINTS E-class P450 group I signature 332 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1633 554 PRINTS E-class P450 group I signature 364 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1633 554 PRINTS E-class P450 group I signature 374 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1633 554 Gene3D Cytochrome P450 12 425 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1633 K20667 CYP716A; beta-amyrin 28-monooxygenase [EC:1.14.14.126] - vvi:100260260 538.11
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1633 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001106 4 2 2 4 4 2 1 2 2 1 2 2 1 0 1 0 2 4 1 2 1 11 0 2 2 2 3 2 1 17 80