Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1747 ATGGAGGCTTTTACAGTTAAGCTGTTTATATCTATAGCTTTGGTAGGTGTTCTTGGACTGTTCTTTCGCCTGTATAATGCCCTGGTGGTGAAGCCGAAGAAGCTGAGATCTATTCTGAGGAACCAAGGGATCAGTGGCCCGCCACCGTCTTTTCTGCTCGGTAACATAAGGGAGATCAAAGAGTCACAGTCCACGGCAGTGAAGGACTCCTGCACCGACACCCACAACTGTGCTGCTGCTCTATTCCCCTTTTTCGAGAAGTGGCGAAATAAATATGGTCAAGTGTTCATGTTTTCACTTGGTAACACACAAATATTACATGTGAATCAACCTGATATTGTTAAAGAAATTACTACATGCACATCCTTGGACTTTGGGAAGCCCTCATACCAACACAGAGAGCTCGGTCCTTTGCTCGGCCAGGGTATTCTAACCTCGAATGGAGCCGTCTGGGCTCATAATAGAAAAATCCTTGCTCCTGAATTGTACATGGATAAGGTCAAGGGAATGATAGGCCTAATTACCGAGTCGGTTGACACATTGTTGAAGACATGGAGGAGCATGATCGAGGCAGAGGGTGGAATTGCAGACATAAGAATCGACGAGCACATGAGAAGCTTCTCAGGAGATGTGATCTCAAGGGCTTGTTTTGGTAGCAGTTACACAAAAGGGGAAGAGATTTTCTTGAGGCTTAGAGCTCTCCAAGAGGCTATGTCCAAGAAAATTTTTTTGGATATTCCCGGAATGAGATATGTTCCCACCAAGCACAACAGAGATGTTTGGGAGCTAGAAAAGGATGTCCGGAATTTGATTCTAAAGGTGGTGAGCGGGAGAGAGGAGTTAGCTGCCCATGAAAAAGATCTACTGCAGATGGTCCTTGAGGGAGCTAAGAACAGCGACCTAAGCCAAGAAGCAATAGACAATTTCATTGTCGATAACTGCAAGAACATCTACTTGGCTGGCTATGAGACCACTGCAGTGTCTGCTGAGTGGTGCCTCATGCTCCTGGCTGCAAATCCAGATTGGCAGGCTCGGGTTCGCGAAGAAGTAGTCGAAATCTGTAAAGGTAGAACTCCAGATGCGGATATGATCCGCAAAATGAAACAGATGACGATGGTGATCCACGAGTCACTGAGACTCTACCCGCCAGTAGCGGTGGTGTCGAGGGAGGCCCTAGCGGACATGAAATTCGGAGGCATCCATGTGCCAAAGGGGGTGAATGTATGGAGCCTGGTGGTGACACTGCACACAGACCCTGAAAATTGGGGACCGGACGCGCTTAAGTTCAACCCTGAGAGTCTGATACTGTCCAATTTTTCATTCTCCCTTTCTCCTAATTATAAACACTCACCTGCACTCAGGCTGGTGATAGAGCCTGAGAATGGAGTCGATCTCTTGGTAAAGAAGTTGTGA 1413 47.06 MEAFTVKLFISIALVGVLGLFFRLYNALVVKPKKLRSILRNQGISGPPPSFLLGNIREIKESQSTAVKDSCTDTHNCAAALFPFFEKWRNKYGQVFMFSLGNTQILHVNQPDIVKEITTCTSLDFGKPSYQHRELGPLLGQGILTSNGAVWAHNRKILAPELYMDKVKGMIGLITESVDTLLKTWRSMIEAEGGIADIRIDEHMRSFSGDVISRACFGSSYTKGEEIFLRLRALQEAMSKKIFLDIPGMRYVPTKHNRDVWELEKDVRNLILKVVSGREELAAHEKDLLQMVLEGAKNSDLSQEAIDNFIVDNCKNIYLAGYETTAVSAEWCLMLLAANPDWQARVREEVVEICKGRTPDADMIRKMKQMTMVIHESLRLYPPVAVVSREALADMKFGGIHVPKGVNVWSLVVTLHTDPENWGPDALKFNPESLILSNFSFSLSPNYKHSPALRLVIEPENGVDLLVKKL* 471
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 28531706 28533746 + Vvi18g1747 Vvi18g1747 781450

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1747 470 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1747 470 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1747 470 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1747 470 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1747 470 Pfam Cytochrome P450 81 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1747 470 Gene3D Cytochrome P450 30 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1747 470 PANTHER CYTOCHROME P450 FAMILY MEMBER 11 432 - -
Vvi18g1747 470 PANTHER CYTOCHROME P450 FAMILY MEMBER 433 464 - -
Vvi18g1747 470 SUPERFAMILY Cytochrome P450 76 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1747 470 PANTHER CYTOCHROME P450 714C2 11 432 - -
Vvi18g1747 470 PANTHER CYTOCHROME P450 714C2 433 464 - -
Vvi18g1747 470 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g1747 470 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1747 K24544 CYP714C; cytochrome P450 family 714 subfamily C - vvi:100253312 916.761
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1747 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000911 2 3 2 1 1 2 0 2 2 3 1 1 6 2 3 7 1 3 3 2 3 4 3 5 5 2 4 3 1 9 86