Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi18g1752 | ATGTCTTATAGCTATTCAGACCCACCAAGCTGCTGCTCAGCTTCTGCTGAATTGAAGCTCTACCAGGCCTTCATCTTCTCTGTTCCAATCTTCTTCACCTTCATTCTCCTTTTGTTGTTCTACCTCTTCTATCTTCGCCGTCGGAGGGTCGATTGGGCTTCGCTTCGGATGCGATCTTCTATGCAGAACGATGCCGATCATGCTTCTGGAGTGTCTGAATTGGGCTTGAAGAAAGAAGTGAGAGAGATGCTTCCCATTATTGTATTCAAGGAAAGCTTCTCTGTCAGTGATACACAGTGCTCAGTATGCCTGGCTGATTATCAAGCAGAGGACAGGCTCCAACAGATACCTGCATGTGGGCACACATTTCATATGGACTGCATCGACCACTGGCTCGCCACCCACACCACCTGCCCACTCTGCCGCCTTTCCCTCACTGCAGCTGCCAGAACTCCGGCTGAACCGCTCACTATCCTAGTAGAAACACCTCATGGAACTTCCCCAGAACAAACACAGCCTGATACACAAGTCTCCCAGCCCAGGAATGAAAATGAAAGAGCTGTTCATACCACCACCATGGAAGCAGAGGGAGGAAGCTCTGAATGTGATGACTGTGAGACTGGAACCAGAGATGCAAGGAATGAGAATGAGAGGCATGAAGTGTAG | 666 | 49.4 | MSYSYSDPPSCCSASAELKLYQAFIFSVPIFFTFILLLLFYLFYLRRRRVDWASLRMRSSMQNDADHASGVSELGLKKEVREMLPIIVFKESFSVSDTQCSVCLADYQAEDRLQQIPACGHTFHMDCIDHWLATHTTCPLCRLSLTAAARTPAEPLTILVETPHGTSPEQTQPDTQVSQPRNENERAVHTTTMEAEGGSSECDDCETGTRDARNENERHEV* | 222 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 28686084 | 28689667 | + | Vvi18g1752 | Vvi18g1752 | 781455 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi18g1752 | 221 | Pfam | Ring finger domain | 99 | 142 | IPR001841 | - | |
Vvi18g1752 | 221 | SUPERFAMILY | RING/U-box | 84 | 152 | - | - | |
Vvi18g1752 | 221 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 61 | 148 | IPR013083 | - | |
Vvi18g1752 | 221 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 10 | 175 | - | - | |
Vvi18g1752 | 221 | ProSiteProfiles | Zinc finger RING-type profile. | 100 | 142 | IPR001841 | - | |
Vvi18g1752 | 221 | PANTHER | RING-H2 FINGER PROTEIN ATL7-LIKE | 10 | 175 | - | - | |
Vvi18g1752 | 221 | MobiDBLite | consensus disorder prediction | 163 | 186 | - | - | |
Vvi18g1752 | 221 | SMART | ring_2 | 100 | 141 | IPR001841 | - | |
Vvi18g1752 | 221 | MobiDBLite | consensus disorder prediction | 203 | 221 | - | - | |
Vvi18g1752 | 221 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 99 | 142 | - | - | |
Vvi18g1752 | 221 | MobiDBLite | consensus disorder prediction | 163 | 221 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi18g1752 | K19039 | - | vvi:100251770 | 422.165 |