Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g1777 ATGGCCTCCCTCGCTGCCACCACCGCCGCCTCCTCCCTCGGCGTCTCCGAGATGCTCGGTAACCCTCTCAACTTCTCCGGCGCCTCCAGAACTGCTCCCTCCGCCTCCAGCCCCGCCACCTTTAAGACCGTCGCCCTCTTCTCCAAGAAGAAGGCTGCGCCAGCCAAGGCCAAGCCCGCCCCCGTTTCACCCGCCGACGAGGAGCTCGCCAAGTGGTACGGTCCGGACAGGAGGATTTTCTTGCCAGAGGGTCTGTTGGACAGATCAGAAATCCCTGCGTACTTGACCGGAGAGGTTCCCGGAGATTATGGTTATGATCCTTTTGGGCTCAGCAAGAAGCCAGAGGACTTCGCCAAATATCAAGCATATGAACTGATCCACGCCCGGTGGGCTATGCTCGGCGCAGCTGGCTTCATCATCCCTGAGGCCTTCAACAAATTCGGTGCCAACTGCGGCCCTGAAGCTGTGTGGTTCAAGACAGGAGCTTTACTCCTTGATGGGAACACACTGAATTACTTCGGAAAGAACATCCCCATTAACCTTATTTTTGCTGTCGTCGCTGAGGTTGTTCTTGTTGGTGGTGCTGAGTACTACAGAATAATCAATGGCTTGGATTTGGAGGACAAGCTTCACCCAGGTGGTCCTTTTGATCCTCTGGGGCTTGCAAATGACCCAGACCAGGCTGCACTGCTTAAGGTGAAGGAGATTAAGAATGGTAGACTGGCGATGTTTGCCATGCTTGGCTTCTTCATCCAAGCTTACGTTACAGGAGAAGGCCCTGTTGAGAACCTTGCAGCCCATCTGAGCGACCCATTCGGAAACAACTTGCTCACTGTTATCGCTGGAACTGCTGAAAGAGCTCCTACCCTGTAA 873 54.52 MASLAATTAASSLGVSEMLGNPLNFSGASRTAPSASSPATFKTVALFSKKKAAPAKAKPAPVSPADEELAKWYGPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIFAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL* 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 29067482 29070189 - Vvi18g1777 Vvi18g1777 781480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g1777 290 Gene3D Chlorophyll a/b binding protein domain 79 290 - -
Vvi18g1777 290 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 290 IPR001344 GO:0009765|GO:0016020
Vvi18g1777 290 SUPERFAMILY Chlorophyll a-b binding protein 71 281 - -
Vvi18g1777 290 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 290 - -
Vvi18g1777 290 Pfam Chlorophyll A-B binding protein 92 253 IPR022796 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g1777 K08916 - vvi:100246457 545.043