Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g182 ATGGGGGCAGCTAATATACTCGGAGTGCTGGTTCTCACACTACTTGTCATGTTTCCAGTTTCTTCTCCAGTCTATGCACTGAGCTTAAACTACTATGATCAGACATGCCCCAAGGCTGAGTCAACAATTTCGGATGCTGTCAAAAAGGCAATGACAAATGACAAAACAGTTCCAGCTGCCCTACTTCGAATGCACTTCCATGATTGCTTCATTAGAGGGTGTGATGCTTCTGTGCTGCTGAAGTCAGTGGGCAAGAACACAGCAGAAAAAGATGGGCCTCCAAACATTTCATTGCATGCATTTTATGTTATTGACAATGCCAAAAAAGCAGTGGAAGCTCTCTGCCCTGGTGTCGTCTCTTGCGCTGATATCTTGGCTCTGGCTGTAAGGGATGCAGTTGCCCTGTCTGGAGGCCCTACTTGGAATGTGTCAAAAGGGAGAAAAGATGGAAGGATCTCAAAGGCAACTGAGACCAGACAGTTACCAGCTCCAACCTTCAACATATCTCAGTTGCAGCAAAGCTTCTCCCAGAGGGGACTTTCCATGGAAGATCTAGTGGCACTCTCAGGCGGTCACACTCTCGGATTCTCTCATTGTTCATCCTTCCAAAACAGAATCCACAACTTCAACTCCACCCACGACGTTGACCCATCCGTACACCCATCATTTGCAGCCAGCCTACGAAGCGTGTGCCCCCTTCACAACAAGGTGAAAAATGCAGGAGCCACCATGGATTCTTCCTCAACTACATTTGATAACACATACTACAAACTTCTCCTCCAGGGGAGGAGTCTGTTCTCTTCAGATCAGGCTCTACTCACTACTACAAAGACCAAAGCGTTGGTCTCTCAATTTGCTAGCTCCAAAGATGAGTTTGAGAAGGCCTTTGTGAAGTCCATGATCAAGATGAGTAGCATCACTGGTGGACAAGAGGTAAGGCTAGACTGCAGGGTGGTCAGGTGA 963 47.35 MGAANILGVLVLTLLVMFPVSSPVYALSLNYYDQTCPKAESTISDAVKKAMTNDKTVPAALLRMHFHDCFIRGCDASVLLKSVGKNTAEKDGPPNISLHAFYVIDNAKKAVEALCPGVVSCADILALAVRDAVALSGGPTWNVSKGRKDGRISKATETRQLPAPTFNISQLQQSFSQRGLSMEDLVALSGGHTLGFSHCSSFQNRIHNFNSTHDVDPSVHPSFAASLRSVCPLHNKVKNAGATMDSSSTTFDNTYYKLLLQGRSLFSSDQALLTTTKTKALVSQFASSKDEFEKAFVKSMIKMSSITGGQEVRLDCRVVR* 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 1781658 1782994 + Vvi18g182 Vvi18g182 779885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g182 320 PANTHER PEROXIDASE 25-RELATED 10 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Vvi18g182 320 ProSiteProfiles Plant heme peroxidase family profile. 26 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 Pfam Peroxidase 45 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 Gene3D - 30 319 - -
Vvi18g182 320 SUPERFAMILY Heme-dependent peroxidases 27 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 CDD secretory_peroxidase 27 319 IPR033905 GO:0004601|GO:0042744
Vvi18g182 320 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g182 320 Gene3D Peroxidase, domain 2 162 303 - -
Vvi18g182 320 PANTHER PEROXIDASE 10 319 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g182 K00430 - vvi:100250514 624.78