Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g229 ATGATCCCTTCTCTTTCATGGAAAACAAATGGGGAAAATAAATTGAGTTATCTGTCCTGTAATATTTGCTTCAAAAGATTCAAAGATTTGAATCCCCTTCTTTTTCTCCTTTATCTGGTTTGCTTTGTTCATTTTGAACCAGATAGAGAGAGGGGCTCTTCAGCTATGTCGACCCAGAATCGCCGTTCCTCAGTTTCTTCGTCGTCGTCGTCGTCGTCCTTGATGAAGCGGTCGTCGTCGGATAATCATGGTAAGGTTACGACGGTGCCGTCGCATTTGGCCAAGAAGCGGCCGCCTCTCAGTAACATTACCAACCAAAAGAATGCTTCTCTGAGTGGGTTAAAAAGCTCGGCTGCGGTCGGGACTATGGTACCATGTGCGGAAAAAATTTCTAAAGCAAAGAGGGGATCTTCTAAAATTTCCCGAAGTGTAGGCATCACTGGAAATACATCATCTGCTTCCTTGAATGTGAAACCAACTGCAGTTATTCCCTGTAAGGACACATCTCTTCCCAAAAGTGATGGAACTGCCTCTACTGTTACCGCCCTTCCAGATCCTTGCAGCTTGGATGTTTCACCGAATCGATCCGATGGTATTTCAGCTTCCATGGATGAGACGATGTCTACTTGTGATTCTTTCAAGAGCCCAGAAGTTGAATATATGGACGTTGATGATTTAGCGGTTAATTCTATTGAGAGGAAGACATGTAGCAAGCTCTACATTTCAGAGCATGTGGAAGCAGAAGGAAATATTTGCAGTGAAGATATACATGTGGAGACAGAAACAAATGGTAAAATTGCTGATATCGATGACAATTTCGGGGATCCACAGTTCTGCGCAACCATGGCTTGTGACATCTACAAGCACCTGCGTGCATCTGAGGCAAGGAAGAGGCCTTCCACAGACTTCATGGAGAGAATTCAGAAAGACGTTAATGCAAGCATGAGGTCAATTCTCATTGATTGGCTTGTGGAGGTTGCTGAAGAGTACAGGCTTGTGCCTGATACATTATACTTGACAGTGAACTTCATAGATCGGTATCTTTCTGGGAATGTGATGAACAGGCAACAGCTACAATTGCTTGGTGTTGCATGCATGATGATTGCTGCCAAGTATGAAGAGATTTGTGCACCCCAGGTGGAAGAATTCTGTTACATAACTGATAACACCTATTTCAAGGAGGAGGTTTTGCAAATGGAATCTTCTGTCCTAAATTACTTAAAATTTGAAATGACAGCTCCAACAGCTAAATGTTTTTTGAGGCGATTTGTTCGAGCTGCTCAAGGAATGAACGAGGTTCCATCGTTGCAGCTCGAGTGCTTGGCGAACTATATAGCCGAGCTATCCCTTCTGGAGTACAGTATGCTCTGTTATGCTCCATCACTTATAGCGGCTTCAGCAATTTTCTTGGCCAACTATATTCTTCTCCCTTCAAAGAGACCTTGGAATTCTACCTTGAGGCACTACACACTCTACCAGCCCTCTGATTTGTGTGATTGTGTTAAGGCTCTTCATCGCCTATGCTGTAACAACCACAATTCTAGTTTACCTGCAATCAGGGAGAAATACAGTCAGCACAAGTACAAATTTGTGGCGAAGAAGTACTGCCCTCCTTCCATACCTTCAGAGCTTTTCCACAACCTAAGCAACTAA 1653 43.56 MIPSLSWKTNGENKLSYLSCNICFKRFKDLNPLLFLLYLVCFVHFEPDRERGSSAMSTQNRRSSVSSSSSSSSLMKRSSSDNHGKVTTVPSHLAKKRPPLSNITNQKNASLSGLKSSAAVGTMVPCAEKISKAKRGSSKISRSVGITGNTSSASLNVKPTAVIPCKDTSLPKSDGTASTVTALPDPCSLDVSPNRSDGISASMDETMSTCDSFKSPEVEYMDVDDLAVNSIERKTCSKLYISEHVEAEGNICSEDIHVETETNGKIADIDDNFGDPQFCATMACDIYKHLRASEARKRPSTDFMERIQKDVNASMRSILIDWLVEVAEEYRLVPDTLYLTVNFIDRYLSGNVMNRQQLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLKFEMTAPTAKCFLRRFVRAAQGMNEVPSLQLECLANYIAELSLLEYSMLCYAPSLIAASAIFLANYILLPSKRPWNSTLRHYTLYQPSDLCDCVKALHRLCCNNHNSSLPAIREKYSQHKYKFVAKKYCPPSIPSELFHNLSN* 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2479869 2485400 - Vvi18g229 Vvi18g229 779932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g229 550 MobiDBLite consensus disorder prediction 51 108 - -
Vvi18g229 550 PIRSF Cyclin_A_B_D_E 53 548 IPR039361 -
Vvi18g229 550 CDD CYCLIN 315 404 IPR013763 -
Vvi18g229 550 PANTHER CYCLINS 84 548 IPR039361 -
Vvi18g229 550 PANTHER CYCLIN-A1-1 84 548 - -
Vvi18g229 550 SUPERFAMILY Cyclin-like 414 539 IPR036915 -
Vvi18g229 550 SMART cyclin_7 418 506 IPR013763 -
Vvi18g229 550 SMART cyclin_7 321 405 IPR013763 -
Vvi18g229 550 Gene3D - 299 412 - -
Vvi18g229 550 Pfam Cyclin, C-terminal domain 414 533 IPR004367 -
Vvi18g229 550 SUPERFAMILY Cyclin-like 274 411 IPR036915 -
Vvi18g229 550 Gene3D - 285 533 - -
Vvi18g229 550 Pfam Cyclin, N-terminal domain 285 411 IPR006671 -
Vvi18g229 550 ProSitePatterns Cyclins signature. 316 347 IPR006671 -
Vvi18g229 550 CDD CYCLIN 412 505 IPR013763 -
Vvi18g229 550 SMART Cyclin_C_2 414 537 IPR004367 -
Vvi18g229 550 MobiDBLite consensus disorder prediction 52 87 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g229 K06627 - vvi:100250590 976.081