Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g233 ATGGGCTGGGGTTCTCTTCACTGGCTTCAGCACTCTCCTGCTTCTTGGCCTGCAAAGTTATGGGGTGAGGAAGTTAGAAATGTTGATAGCAGTGCTGGTATTCATAATGGCTGGTTGTTTCCTTGGAGAAATGAGTTATGTGAAGCCTCCAGCCTCAGGTGTGTTATAAAGGGCATGTTCATTCCCAAGCTTAAAGGCCAGTGTGCCACCGGTGATGCCATTGCCATCTTGGGTGCTCTGGTTATGCCCCATAATCTCTTCCTCCATTCTGCTCTTGTACTCTCTAGGAAGATGCCCAATTCAGTCCGTGGCATCAATGAGGCATGTCGATATTTCTTAATAGAGAGCGTATTAGTGTTATTTGTAGCATTTTTAATCAATGTTGCAGTTGTTTCCATGTCGGACACTGTTTGTTCTGCTGACAATCTTTCAAAAGAAAACTTGGATCAATGCAATGATCTTAATCTTAATTCTGCTTCTTTCCTCCTCAAGAATGTGTTGGGAGGGTCAAGCAAGGTGGTCTATGCCATTGTGCTTTGCCTCAGGCCAAAGTTCCACCATCACAGGCACTTATGCTGGACAATATATCATGCAGGGTTTCTTGGATATTAA 612 44.12 MGWGSLHWLQHSPASWPAKLWGEEVRNVDSSAGIHNGWLFPWRNELCEASSLRCVIKGMFIPKLKGQCATGDAIAILGALVMPHNLFLHSALVLSRKMPNSVRGINEACRYFLIESVLVLFVAFLINVAVVSMSDTVCSADNLSKENLDQCNDLNLNSASFLLKNVLGGSSKVVYAIVLCLRPKFHHHRHLCWTIYHAGFLGY* 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 2519474 2521072 + Vvi18g233 Vvi18g233 779936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g233 203 Pfam Natural resistance-associated macrophage protein 54 179 IPR001046 GO:0016020|GO:0030001|GO:0046873
Vvi18g233 203 PANTHER METAL TRANSPORTER NRAMP5 54 181 - -
Vvi18g233 203 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 54 181 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g233 K21398 - vvi:100266052 224.172