Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g26 ATGGCTCTGCGGCAGCCTTGTTCAGTTTCATCATCTTCATCGTCTTTCTTCGGAGGTTATCGCCACAGACTCTGCTCGAAGATATCATGGCCAAAATCTCGAAATGTCAACTCCACCAGTACTTATTCAGGTTGCAAAGCTTCATGGCAAGAGCTCGCCGGCGTTTTAATATTCTCAGCGATTCCTTTCACCGCCGTTAAAGCCATAGCGAATAGCCCTCTCGGAGAGTCGCTTCAGAGCCGAATGGAGGAGAATAAGAAGGCCGCCGTAAAGAATTCTTCAAAGTTCAAGGCCTTAGCTGAAAAGGCTAAAAACGAGAGTCTGTGGTATGGAGAAGAACGTCCTCGCTGGCTTGGTCCAATCCCATATGACTATCCTGCATATCTCACTGGAGAACTTCCTGGGGATTATGGCTTTGATATTGCTGGTCTGGGCAAGGATCCTGTGGCTTTCCAAAAATATTTCAATTTTGAGATACTGCATGCGCGCTGGGCTATGCTTGCAGCCCTTGGTGCTCTACTTCCAGAATTATTAGACCTATTGGGAGCCTTTCACTTTGTTGAACCTGTCTGGTGGCGAGTCGGCTATTCAAAGCTCAAGGGAGATACATTAGACTATCTTGGCATCCCAGGATTTCACTTTGCTGGAAGCCAAGGAGTAATTGTCATTGCTATTTGCCAAGCCCTGCTGATGGTTGGACCAGAATATGCAAGATATTGTGGGATTGAAGCTTTGGAGCCTCTGGGAATTTACCTGCCTGGTGATATTAATTATCCAGGAGGAGCTCTTTTTGATCCCCTGAATCTCTCTAAAGATCCTGTAGCCTTTGAAGAGCTGAAGGTGAAAGAAATTAAAAACGGGCGCTTAGCAATGGTTGCCTGGCTGGGGTTTTATATACAAGCTGCTGCTACAGGTAAAGGTCCTGTACAAAACCTTCTTGACCACTTAGCAGATCCCTTCCACAATAACCTGCTTTCCATTTTCAAAGCCTTGTAA 996 45.98 MALRQPCSVSSSSSSFFGGYRHRLCSKISWPKSRNVNSTSTYSGCKASWQELAGVLIFSAIPFTAVKAIANSPLGESLQSRMEENKKAAVKNSSKFKALAEKAKNESLWYGEERPRWLGPIPYDYPAYLTGELPGDYGFDIAGLGKDPVAFQKYFNFEILHARWAMLAALGALLPELLDLLGAFHFVEPVWWRVGYSKLKGDTLDYLGIPGFHFAGSQGVIVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPVAFEELKVKEIKNGRLAMVAWLGFYIQAAATGKGPVQNLLDHLADPFHNNLLSIFKAL* 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 381744 387296 - Vvi18g26 Vvi18g26 779729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g26 331 Gene3D Chlorophyll a/b binding protein domain 116 328 - -
Vvi18g26 331 Pfam Chlorophyll A-B binding protein 126 301 IPR022796 -
Vvi18g26 331 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 42 324 IPR001344 GO:0009765|GO:0016020
Vvi18g26 331 SUPERFAMILY Chlorophyll a-b binding protein 108 328 - -
Vvi18g26 331 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 7, CHLOROPLASTIC 42 324 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g26 K14172 - vvi:100256544 592.808