Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g284 ATGGGAGACCAAACCCTTTTTGTCAAGCTGAGCCTGATGTTCTCCAAGGTGAAAGCGTATTTGGGCATTGTCTCCCTGCAGTTCGGCTATGCTGGCATGTACATCATCACCATGGTTTCTTTGAAGCATGGGATGAATCACTACGTACTTGTAGTGTACCGACATGCAGTAGCCACTCTTGTGATCGCGCCTTTCGCACTTGTTCTTGAAAGGAAAGTAAGGCCAAAGATGACACTCTCAACCTTCCTAAAAATAATGGTGCTTGGCTTCCTAGAGCCAGTGCTTGATCAAAACTTATACTATGTGGGGATGAAGTATACATCAGCAACCTTTGCTTCTGCCACTGTCAATGTCCTCCCTGCTATTACTTTCATACTGGCAATTATCTTCAGGTTGGAGAAAATTAATATTAAGAAGATACCCAGCCAAGCTAAGGTGATCGGAACCTTAATCACAGTCACAGGAGCCATGGTGATGACACTGTACAAAGGTCCCATCATTGACTTTATACACACACGAGGAATAAGCCACCATGAATCCTCCAGTGATCCCTCGGCAGGCCAAAATTGGGCCACCGGAACCCTAATGCTCCTAGGCAGCTGCTTTGGTTGGTCTGGTTTCTTCATATTGCAATCATTTACACTGAAGCAATACCCAGCGGAGCTCTCTCTCACAGCCTTGATATGCTTTATGGGGACGGTGCAAGGAGCGGCCGTGGCACTTGTGATGGAACGCGACAAAGCTGCTTGGGCAGTAGGCTTCGACTCCAGAATCTTGGCTGCAGCTTATTCTGGGGTAGTTTGCTCTGGAATTGCATATTATGTGCAAAGTCTAGTGATCAAAGAACGAGGCCCCGTGTTTGTAACTGCTTTCAGCCCTCTGTGCATGATTATCACTGCAGCTCTGGGGTCCTTCATTTTGGCCGAGAAACTCCACCTGGGAAGTATACTTGGAGCGGCCGTGATAGTCGTAGGCCTTTATTCGGTGGTGTGGGGCAAAAGCAAGGAGGCCAGAAGCTCAGCATCACAGGCGCCGACAGATGAGAAAGCAGGTGGGAGCCATGAATTGCCAGTTGCAAGCAGCACTAAACCAAGCATTGTCCATAACAACAATATGGAAGGAGATGGTGGAATGTTGAAGATTCGCGTGTCAGAGGCATCATCAATGATTGAATGA 1176 47.62 MGDQTLFVKLSLMFSKVKAYLGIVSLQFGYAGMYIITMVSLKHGMNHYVLVVYRHAVATLVIAPFALVLERKVRPKMTLSTFLKIMVLGFLEPVLDQNLYYVGMKYTSATFASATVNVLPAITFILAIIFRLEKINIKKIPSQAKVIGTLITVTGAMVMTLYKGPIIDFIHTRGISHHESSSDPSAGQNWATGTLMLLGSCFGWSGFFILQSFTLKQYPAELSLTALICFMGTVQGAAVALVMERDKAAWAVGFDSRILAAAYSGVVCSGIAYYVQSLVIKERGPVFVTAFSPLCMIITAALGSFILAEKLHLGSILGAAVIVVGLYSVVWGKSKEARSSASQAPTDEKAGGSHELPVASSTKPSIVHNNNMEGDGGMLKIRVSEASSMIE* 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3177009 3180121 - Vvi18g284 Vvi18g284 779987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g284 391 Pfam EamA-like transporter family 31 160 IPR000620 GO:0016020|GO:0016021
Vvi18g284 391 Pfam EamA-like transporter family 193 330 IPR000620 GO:0016020|GO:0016021
Vvi18g284 391 PANTHER WAT1-RELATED PROTEIN 13 358 - -
Vvi18g284 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 335 - -
Vvi18g284 391 PANTHER WAT1-RELATED PROTEIN 13 358 IPR030184 GO:0016021|GO:0022857
Vvi18g284 391 MobiDBLite consensus disorder prediction 340 374 - -
Vvi18g284 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g284 - - vvi:100242142 759.214