Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g285 ATGATATCCATACTAAACAATCACACAAATTGCTTTTTGTACCTCAATAAGATGAAACCTTATTTGCTTATGGTAGCCTTGCAATTTGGCTCTGCAGGGATGTACATAATCTGCATGGCCACCCTCACCCATGGGATGAGCCGTTACGTTCTCGTTGTGTACCGCAATGCGGTAGCTACGCTTGCTATCGCGCCCTTTGCTCTGCTTCTTGAAAGGAAAGGAAGGCCAAAGTTGACATTCTCAATCTTCTTGAAGATTATGGCGCTAGGCTTTCTGGAGCCAATTGTTGATCAGAACTTATCCTACTTGGGAATGCAATACACATCAGCCTCATATGCATCCGCCATTATGAATGCTGTTCCGGCTGTTACTTTTGTTATGGCGATTATTTTTCGATTAGAGCACATAAAAATTAAGGAGACACGTACTCAAGCCAAGATCATTGGAACCCTGGTGACCTTTTCTGGAGCATTGCTCATGACTTTGTACAAGGGCCCCATCATCGATATAATGCACTCACACAAAGCAAGTCACCAAGCAAACCACTCGTCCTCTAAACATTGGCTCATCGGAACAATTTTGATACTTATGGGCTGTTGTGCTTGGTCTGCCTTTTTCATATTACAATCCATAACAATTAAGGCATACCCAGCTGAGCTCTCGCTTTCCACCTTGATATGCTTGATGGGCACGGTCCAAAGTGCGGCTGTAGGGCTTATAGCAGAGCGGAAGCCACGCACCTGGTCAATTGGCTGGGACTCTAGGCTACTTGCTCCTGTTTATACAGGTATAATCAGCTCTGGAATAACATACTATGTGCAAGGCCTGGTGATGAAGACGAAGGGCCCAGTGTTTGTAACAGCATTCAACCCTCTTTGCATGGTCATCGTTGCTGCTCTGGGGTCTCTCATTCTAGCTGAGGAGCTCCACCTAGGAAGTATCATTGGAGCCATCATCATCGCTGTAGGCCTTTACTCGGTGGCGTGGGGCAAAAGCAAGGATCATTTCAGCCCAGCACCATCAACAACAGGAGAAAAGACCGATCCCTACCAGCTGCCCATTTTGGCGACTGAGAACACCAAGTTGGTGATTGAGGGAAGTAATTACGATGATGATGAAAAAGCTGCAAAATCCAAAGAAAAAACTTTGAGCAGAAAGTTCCGGTCCTCCCCTGGATTTAAGTTATGCTGCAAGGATTGTGGTTGTAGTTATTTTAAAATAGAAGGGAGTCAATGGTCATGTGTACTTAGATTTCGAGAACTTGCTGATGCTGGATTTGTGCAATCTCTCAAAAAAGCAACCTGGGAGGTTTGTATGCCAATTATTTATGGATCATTACATCAGCCTCACTATGTTAATTGTTTTTCTTAG 1371 44.42 MISILNNHTNCFLYLNKMKPYLLMVALQFGSAGMYIICMATLTHGMSRYVLVVYRNAVATLAIAPFALLLERKGRPKLTFSIFLKIMALGFLEPIVDQNLSYLGMQYTSASYASAIMNAVPAVTFVMAIIFRLEHIKIKETRTQAKIIGTLVTFSGALLMTLYKGPIIDIMHSHKASHQANHSSSKHWLIGTILILMGCCAWSAFFILQSITIKAYPAELSLSTLICLMGTVQSAAVGLIAERKPRTWSIGWDSRLLAPVYTGIISSGITYYVQGLVMKTKGPVFVTAFNPLCMVIVAALGSLILAEELHLGSIIGAIIIAVGLYSVAWGKSKDHFSPAPSTTGEKTDPYQLPILATENTKLVIEGSNYDDDEKAAKSKEKTLSRKFRSSPGFKLCCKDCGCSYFKIEGSQWSCVLRFRELADAGFVQSLKKATWEVCMPIIYGSLHQPHYVNCFS* 457
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3180623 3189934 - Vvi18g285 Vvi18g285 779988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g285 456 Pfam EamA-like transporter family 21 161 IPR000620 GO:0016020|GO:0016021
Vvi18g285 456 Pfam EamA-like transporter family 190 327 IPR000620 GO:0016020|GO:0016021
Vvi18g285 456 PANTHER WAT1-RELATED PROTEIN 17 351 - -
Vvi18g285 456 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 332 - -
Vvi18g285 456 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
Vvi18g285 456 PANTHER WAT1-RELATED PROTEIN 17 351 IPR030184 GO:0016021|GO:0022857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g285 - - vvi:100264284 704.516