Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g286 ATGGAGGACCAAACATCATGTGCCAAAATTTGTGTCGTCTTCAGTAGGATGAAACCTTACGTGCTTATGGTGGCCTTGCAGTTTGGGTCCGCAGGGATGTACATCATTTCCATGGCTACTCTCAACCATGGTATGAGCCGTTTCGTGCTGATCGTTTATCGTAATGCTGTTGCTGCACTGGCCATGGCACCTTTTGCTCTACTTCTTGAAAGGAAAATAAGGCCAAAGATCACAATCGCTATCTTCTTAAAGATAATGGCCCTGGGATTTCTGGAGCCGATTCTTGATCAGAACTTATCCTACTTGGGTATGCAATACACATCAGCATCATTCACATCTGCCGTTATGAATGCTGTTCCGGCTGTTACCTTTGTAATGGCAGTTGTTTTCCGGTTGGAGCACATAAAAATTAAAGAGAGACGGAGCCAAGCTAAGATCGTGGGCACGGTACTGACTTTTTCAGGAGCACTGCTTATGACTCTGTATAAAGGCCCCATCATTGATCTAATATGGTCACATAAAACAAGTCACAATGCCAATCACTCTTCCACCGACACACACTGGATAACTGGGACTTTGTTGATCCTTGTTGGTTGTTGTGCCTGGTCTGCCTTCTACATACTGCAATCAATAACAATAAAGACGTACCCAGCCGAGCTCTCTCTTTCCACCTTGATATGCTTGATGGGTGCCATCCAAAGTGGGGCAGTAGGGCTTGTAGCAGAGCGACACCCCAGCGCCTGGGCCATTGGCTGGGACTCTAGGCTACTTGCTCCTGTTTATACGGGGATTGTCAGCTCTGGATTAACATACTACGTGCAAGGCCTGGTGATGAAGACAAGAGGCCCAGTGTTTGTGACAGCATTCAACCCTCTTTGCATGATCATTGTAGCTGCTCTTGGGACTCTCATTCTAGCTGAGCAACTCCATCTTGGAAGTATCATTGGAGCCATTATCATCGCAATCGGCCTTTACTCTGTGGCATGGGGTAAAAGCAAGGACCAATTTGGGCCAACACCAACCACAACAGAAGAAAAGGGTGATGCCTACGAATTGCCCATTTCAGCAACCGAGGGTAGCAAGTTGGTGATTGAGGCAAATAACTATGGTGACCATGCTGGAAAATCCAATTTTCCAGTTAAGAAATAG 1149 46.3 MEDQTSCAKICVVFSRMKPYVLMVALQFGSAGMYIISMATLNHGMSRFVLIVYRNAVAALAMAPFALLLERKIRPKITIAIFLKIMALGFLEPILDQNLSYLGMQYTSASFTSAVMNAVPAVTFVMAVVFRLEHIKIKERRSQAKIVGTVLTFSGALLMTLYKGPIIDLIWSHKTSHNANHSSTDTHWITGTLLILVGCCAWSAFYILQSITIKTYPAELSLSTLICLMGAIQSGAVGLVAERHPSAWAIGWDSRLLAPVYTGIVSSGLTYYVQGLVMKTRGPVFVTAFNPLCMIIVAALGTLILAEQLHLGSIIGAIIIAIGLYSVAWGKSKDQFGPTPTTTEEKGDAYELPISATEGSKLVIEANNYGDHAGKSNFPVKK* 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3190005 3192536 - Vvi18g286 Vvi18g286 779989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g286 382 PANTHER WAT1-RELATED PROTEIN 16 350 - -
Vvi18g286 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 332 - -
Vvi18g286 382 Pfam EamA-like transporter family 19 160 IPR000620 GO:0016020|GO:0016021
Vvi18g286 382 Pfam EamA-like transporter family 190 327 IPR000620 GO:0016020|GO:0016021
Vvi18g286 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Vvi18g286 382 PANTHER WAT1-RELATED PROTEIN 16 350 IPR030184 GO:0016021|GO:0022857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g286 - - vvi:100242002 741.495