Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi18g336 | ATGATTACCCTGAAATGTGCTGCATGTGGGTTTGTTTCAGATGTCGATATGAGGGATAAGCTCACAACATTTATCCTCAAGAATCCTCCTGAGCAAAAGAAAACATCAAAAGACAAGAAGGCAATGAGAAGGGCTGAGAAGGAGCGGCTCAAGGAAGGGGAGGCTGCTGATGAGGAGCAGAAGAAGCTGAAAAAAGAGGCTAATGAAACAGAACCTGCTGATGAAAGTGATGATGATGTCCAATGGAAAACGGACCCATCTGTGGAGGCAGCTCAGCAACGAATCAAGGAACAACTGAGTGCTGGAGCCCAAAATGGGACTAAATCAGGTAATAATCAAGAAAGGCTTGTTGATGAAATCAAAGAGTATCTGAAGAAGGGTCCTTCTGCAGTCAAACTCAAGAACTTTTTGGGATCCCTTTCAGGGACTTCCCAAGAAATCATTGATGCCCTGTTTGAAGCTCTATTTATGGGCATTGGGAAGGGGCTTGCTAAAGAGGTGGCCAAAAAGAAAACCTACCTGGCAGCAGTCACCCAGGAAGATCGTTCGCAGTCCATTCTGCTGCGTGCTATTGAGTCCTTTTGTGGGAAATCAAATCCTGAGGCAGTAAAAGAGGTGGGCTTGGTTCTGAAAGCGCTGTATGACAATGATTTGCTGGAGGAAGAGTTCATACTAGAGTGGTATAAGCAGGGCTTGGCTGGTGGGAATAAGAACTCTAAGATCTGGAAGAATGTCAAGCCTTTCATTGAATGGCTCCAGAGTGCCGAGTCTGAATCAGAAGAGGAGTGA | 789 | 45.5 | MITLKCAACGFVSDVDMRDKLTTFILKNPPEQKKTSKDKKAMRRAEKERLKEGEAADEEQKKLKKEANETEPADESDDDVQWKTDPSVEAAQQRIKEQLSAGAQNGTKSGNNQERLVDEIKEYLKKGPSAVKLKNFLGSLSGTSQEIIDALFEALFMGIGKGLAKEVAKKKTYLAAVTQEDRSQSILLRAIESFCGKSNPEAVKEVGLVLKALYDNDLLEEEFILEWYKQGLAGGNKNSKIWKNVKPFIEWLQSAESESEEE* | 263 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 3741184 | 3745653 | + | Vvi18g336 | Vvi18g336 | 780039 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi18g336 | 262 | Gene3D | - | 89 | 253 | - | - | |
Vvi18g336 | 262 | Gene3D | - | 1 | 33 | - | - | |
Vvi18g336 | 262 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED | 109 | 262 | - | - | |
Vvi18g336 | 262 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED | 1 | 71 | - | - | |
Vvi18g336 | 262 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED | 75 | 101 | - | - | |
Vvi18g336 | 262 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 109 | 262 | IPR045196 | GO:0003743|GO:0006413 | |
Vvi18g336 | 262 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 1 | 71 | IPR045196 | GO:0003743|GO:0006413 | |
Vvi18g336 | 262 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR | 75 | 101 | IPR045196 | GO:0003743|GO:0006413 | |
Vvi18g336 | 262 | CDD | W2_eIF5 | 111 | 255 | - | - | |
Vvi18g336 | 262 | SUPERFAMILY | ARM repeat | 110 | 256 | IPR016024 | - | |
Vvi18g336 | 262 | SMART | 542_3 | 171 | 258 | IPR003307 | GO:0005515 | |
Vvi18g336 | 262 | Coils | Coil | 42 | 62 | - | - | |
Vvi18g336 | 262 | MobiDBLite | consensus disorder prediction | 31 | 84 | - | - | |
Vvi18g336 | 262 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 184 | 262 | IPR003307 | GO:0005515 | |
Vvi18g336 | 262 | MobiDBLite | consensus disorder prediction | 24 | 91 | - | - | |
Vvi18g336 | 262 | ProSiteProfiles | W2 domain profile. | 102 | 262 | IPR003307 | GO:0005515 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi18g336 | K03262 | - | vvi:100262554 | 448.358 |