Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g337 ATGAAGAGGAATTCGAACAGCGAACTGTTTATTGGGGTGAGGAGGGACGCGAGATGGAACAGGAATGGAGAGAGGAGCAGCAGTGGTAGGGTTCGGGCGGAGGAAGTGGCGGTGGCTGCAGAATTGGCAGCGCAGGGCATGCCGTTCGAGGTTGTTTACTATCCACGGGTAGGGTCATCTGACTTTGTGGTGAAGGCGGAGGTGGTGGAGGAAGCGCTGAGTGTCTTCTGGACTGGAGGCATGAGGGTCAAAATGGCGATGGAGACTGAGGATTCATCCAAAACTTCATTGTTCCAAGGGACAGTTTCGTCTGCTACGGTTATGGATAATGGGCCTTGGAGGGGCTCCCTCTGGCGCATGCTTCAGGTTACATGGGATGAACCTGAAGTTCTGCAGAATGTGATGAGAGTGAGTCCTTGGCAAGTTGAATTGGTTATGCCCACACCACCATTTCATACCACACCACCCCCAGCAAAGAGATTCAGAATTGCTCAAAGTCCAGAGCTACCAAGTGATGGAGAGGGAGAAATCTTCTTTCCTATGGCTGATACAGTGATGGGAATCTTGAACCCCTCATTGTTGAATCATAACACTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAGATTCTTTCTATGTATCCAGTTTATCCAACTTAACAAGCGAAAATACCCATCAGATGTGCACCATCAATTCACTGGATGACATGGCAACAAAGTTGAACACTGTGTCTACTGAGCTGAACATAGGCAGTTCACTGTCTGACAACTTATCACCAGATAGCCAGGGCAGTGTGCATTTCTTTGGTACCAAACCTGTTGGAAATCAGGATGGCAACTCCTCAACAAAAGTTGGTATTCATTCATTTCAGTTGTTTGGCAAGGTCATTCATATAAAGCAGCCTGTTGAAGGTAATTGCAGCGCTGATGGTTGCACAGAAGATGGTAGTAAAAAAATACAATGA 963 47.66 MKRNSNSELFIGVRRDARWNRNGERSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQVTWDEPEVLQNVMRVSPWQVELVMPTPPFHTTPPPAKRFRIAQSPELPSDGEGEIFFPMADTVMGILNPSLLNHNTFPAGMQGARQDSFYVSSLSNLTSENTHQMCTINSLDDMATKLNTVSTELNIGSSLSDNLSPDSQGSVHFFGTKPVGNQDGNSSTKVGIHSFQLFGKVIHIKQPVEGNCSADGCTEDGSKKIQ* 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 3748755 3757534 + Vvi18g337 Vvi18g337 780040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g337 320 Gene3D - 77 148 - -
Vvi18g337 320 Pfam Auxin response factor 39 122 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Vvi18g337 320 PANTHER AUXIN RESPONSE FACTOR 25 318 - -
Vvi18g337 320 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 25 318 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g337 - - vvi:100255673 599.742