Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g368 ATGCACTCATTACAGACAGAGACCCTCTCCATGCCCATGGAGCAGCAACAGCAGCTCAACATTGAAGATGGTAGCAAGACTCAGAGGGCTGAGTGGGTGCTTAATTCCCCTGAACCGCCAGGTCTATGCCATGAGATTGTCAGTTCAATAAAATCGGCTGTTTTTCCTAATGGAGGCAAGCACTCTTCATCCTCCACAAAGCAAACTCGATCTACAGCCGCAGGTGTTGTTTCATTCTTGTATGGTCTATTCCCAATTCTTACCTGGGGAAGAAATTACAAGGCTACAAAGTTCAGAAACGATTTAATGGCAGGCTTAACTCTAGCAAGTTTAAGCATTCCTCAGAGCATCGGATATGCAACTCTGGCGAACCTCGCACCTCAGTATGGTCTATACACAAGCGTGGTTCCGCCTCTGGTTTATGCTTTAATGGGAAGCTCAAGAGAGATAGCCATTGGACCGGTAGCTGTGGTTTCCTTGCTGCTGTCTTCGATGATTCAGAATGTAGTAGATCCTGTAGCTAATGCCGTTGCCTACAGAAAGCTCGTCTTGACAGTAACTTTCTTTGCCGGTACCTTCCAATTCATATTTGGATTGTTCAGGCTGGGTTTTCTGGTGGATTTTCTCTCACATGCTGCCATTGTTGGATTCATGGGAGGTGCAGCCATTGTCATTGGCCTTCAACAACTGAAGGGGCTACTTGGAATCAGTCACTTCACCACCAAAACTGATGTTGTTTCAGTGTTGGAGGCTGTTTTCAGGTCACTTCATCATCAATGGTACCCCCTGAACTTTGTCCTCGGTTGTTCATTCCTGATTTTCATCCTATTTACCAGGTTTATTGGTAGAAGGAACAAAAAGCTTTTCTGGTTGCCAGCGATTGCTCCTCTGATATCGGTTGTTTTATCTACTGCTATAGTCTTCCTGACAAAGGCAGATGAGCATGGTGTTAAGATAGTAAAGCACATCAAACGAGGCTTGAACCCGATTTCTGCTCACGAATTACAGTTTAGTGGGCAACATGTGGGACAAGCAGCCAAAATTGGATTAGTTTCTGCCATTGTTGCTCTCACTGAAGCCATTGCTGTTGGCCGATCGTTTGCTTCCATTAGAGGCTACCACCTTGATGGGAACAAGGAAATGGTAGCCATGGGCTTCATGAATATTGCAGGATCTTTGACCTCTTGCTATGTAGCAACTGGTTCTTTTTCGAGGACCGCCGTAAATTTCAGTGCAGGATGTGAAACAGTGGTATCAAACATAGTAATGGCCATTGCAGTGTTTTTATCACTGGAATTGTTAACTAGGCTATTGTACTTCACCCCAATTGCCATTCTTGCTTCAATTATTCTATCAGCTCTCCCTGGACTGATTGACATACCTGAAGCTTACCATATCTGGAAGGTAGACAAAATGGACTTCCTTGCTTGTGCCGGTGCCTTCTTTGGAGTTCTGTTTGTATCAGTGGAGATTGGTCTTCTAGCTGCGGTAACAATCTCATTTGCAAAGATAATACTAAATTCCATTAGGCCCAGCGTAGAAGGATTGGGCAAACTCCCTGGAACAGATATCTTCTGTGACATCAATCAATATCCCATGGCCATCAAAACTCCAGGCATCTTGATTGTTCGCATCAACTCCGGATTGCTTTGCTTTGCTAATGCCAATTTCGTAAGAGAAAGAATAATGAAGAGGGTGACTGAAAAAGACGAAGAAGGCAAAGAAAACTCAAAGGAAAGAACTCAAGCAGTAATCCTTGACATGTCCACTGTCATGAACATTGACACTTCGGGAATCTGTGCGCTACAAGAAGTGTACAATAAGTTGGTTTCACATAACATACATTTAGCAGTAGCCAATCCAAGGTGGCAAGTGATACACAAGTTGAAGTTAGCCAAAGTTGTAGATAAAATTGGGAAAGACTGGATTTTCCTCAGTGTTGGGGAAGCTGTAGATGCATGCAGCTCTAAAATGGTCAATTTTAGCAGCTGTTGA 1995 43.76 MHSLQTETLSMPMEQQQQLNIEDGSKTQRAEWVLNSPEPPGLCHEIVSSIKSAVFPNGGKHSSSSTKQTRSTAAGVVSFLYGLFPILTWGRNYKATKFRNDLMAGLTLASLSIPQSIGYATLANLAPQYGLYTSVVPPLVYALMGSSREIAIGPVAVVSLLLSSMIQNVVDPVANAVAYRKLVLTVTFFAGTFQFIFGLFRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGISHFTTKTDVVSVLEAVFRSLHHQWYPLNFVLGCSFLIFILFTRFIGRRNKKLFWLPAIAPLISVVLSTAIVFLTKADEHGVKIVKHIKRGLNPISAHELQFSGQHVGQAAKIGLVSAIVALTEAIAVGRSFASIRGYHLDGNKEMVAMGFMNIAGSLTSCYVATGSFSRTAVNFSAGCETVVSNIVMAIAVFLSLELLTRLLYFTPIAILASIILSALPGLIDIPEAYHIWKVDKMDFLACAGAFFGVLFVSVEIGLLAAVTISFAKIILNSIRPSVEGLGKLPGTDIFCDINQYPMAIKTPGILIVRINSGLLCFANANFVRERIMKRVTEKDEEGKENSKERTQAVILDMSTVMNIDTSGICALQEVYNKLVSHNIHLAVANPRWQVIHKLKLAKVVDKIGKDWIFLSVGEAVDACSSKMVNFSSC* 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4048719 4052933 - Vvi18g368 Vvi18g368 780071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g368 664 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 18 660 - -
Vvi18g368 664 PANTHER SULFATE TRANSPORTER 18 660 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi18g368 664 Pfam Sulfate permease family 98 478 IPR011547 GO:0016021
Vvi18g368 664 Gene3D STAS domain 510 658 IPR036513 -
Vvi18g368 664 CDD STAS_SulP_like_sulfate_transporter 531 647 - -
Vvi18g368 664 ProSiteProfiles STAS domain profile. 547 654 IPR002645 -
Vvi18g368 664 TIGRFAM sulP: sulfate permease 85 650 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi18g368 664 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Vvi18g368 664 SUPERFAMILY SpoIIaa-like 535 655 IPR036513 -
Vvi18g368 664 Pfam STAS domain 531 650 IPR002645 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g1094 Vvi18g368 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g368 K17469 - vvi:100252269 1279.62