Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g369 ATGGGGCCCCATTCAACTGATGAGGTGCCAGAAGCGAAAGAGGACATTCGTAGCCTGTCATCCTCACACAGACATACGCCGAACTTGCCGTACATGCACAAGGTGGGAGTTCCCCCTAAGCAAAATCTCTTCAAGGAATTCAAAACCACAGTGAAGGAGACGTTCTTTGCAGATGATCCTCTTCGCTCTTTCAAGGATCAATCTAAATCTCGGAAGTTCATTCTAGGCATCCAGGCTATTTTCCCCATTCTTGAATGGGGGAGAAGCTACAACCTAACTAAGTTTAGAGGGGATCTCATTGCTGGACTCACCATTGCAAGTCTCTGCATTCCTCAGGATATCGGGTATGCAAAACTTGCATCTTTGGAACCTCAGTATGGGCTATACTCCAGCTTCGTTCCTCCACTGATTTATGCCTTCATGGGCAGTTCAAGAGACATAGCCATAGGGCCAGTTGCTGTGGTGTCTCTCTTACTAGGAAGTCTGCTTCGGGCAGAGATTGATCCCACAGAAAATCCAGCAGAGTATCTGCGGCTTGCATTCACAGCTACATTTTTTGCTGGGATCACACAAGCCACACTTGGATTTTTTAGATTAGGTTTCTTGATCGATTTCTTATCCCATGCTGCCATTGTTGGTTTTATGGGTGGAGCTGCGATTACAATAGCCCTCCAACAGCTTAAAGGTTTTCTTGGCATCAAGAATTTCACAAAGGAAACTGATATTATTTCTGTAATGCATTCAGTATGGGCCTCAGTTCATCACGGGTGGAACTGGCAGACTATAGTCATTGGGGCTACCTTTTTGGGTTTTCTTCTATTTGCTAAGTACATTGGAAAGAAGAACAAGAAATTTTTCTGGGTACCTGCAATTGCTCCATTGATATCAGTTATTCTGTCTACCTTCTTCGTGTACATTACCCGTGCAGATAAGAAAGGTGTTCAAATTGTGAAACACATAGATAAAGGAATCAATCCTTCATCTGCAAGTCAAATATATTTCAGTGGTGTTTATCTCCTAAAAGGATTTAAAATTGGTGTTGTGGCTGGTTTGATAGCATTGACGGAAGCCGTGGCAATTGGCAGAACATTTGCTTCCATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTGGCCCTAGGAGCAATGAATATTGTTGGTTCAATGACTTCTTGCTATGTGGCAACAGGTTCCTTCTCTCGTTCAGCAGTAAACTACATGGCCGGATGCAAGACTGCAGTCTCTAACATTGTGATGTCCTGTGTTGTATTCCTAACCCTGGAATTCATCACACCTCTTTTCAAATACACCCCAAATGCCATTCTTGCTTCCATCATTATATCTGCTGTGATTGGCCTAATTGACTACGATGCAGCAATTCTGATATGGAAGATTGATAAATTTGATTTTGTTGCTTGCATGGGAGCCTTCTTTGGTGTGGTTTTTAAATCTGTTGAGATTGGTCTCTTAATTGCGGTTGCCATATCCTTTGCCAAGATCCTCCTACAAGTTACAAGGCCAAGGACTGCAATTCTTGGGAAGCTCCCTAGGACAACTGTTTACAGGAACATCCAACAATATCCAGAGGCAACTAAAATTCCAGGCTTGTTAATTGTGAGGATTGATTCTGCAATCTACTTTTCCAATTCTAACTACGTCAAGGAAAGGATACTGAGATGGTTGACTGATGAGGAAGAACACTTGAAAAAAGCCAACCTACCAAGAGTTCAATTTTTGATTGTTGAGATGTCCCCTGTAACTGACATAGACACCAGTGGCATCCATGCATTGGAAGAGTTACACAGGAGTCTCCTAAAGAGAGATGTCAAACTGGTTCTGGCAAATCCTGGGCAAGTGGTTATCGACAAGCTTCATGCATCCAAGTTCGCAGATGATATCGGCGAGGACAAGATCTTTCTCACGGTTGGAGATGCTGTCGTAACCTGCTCTCCCAAGTTGGCAGAGGAAGTTTAA 1977 43.1 MGPHSTDEVPEAKEDIRSLSSSHRHTPNLPYMHKVGVPPKQNLFKEFKTTVKETFFADDPLRSFKDQSKSRKFILGIQAIFPILEWGRSYNLTKFRGDLIAGLTIASLCIPQDIGYAKLASLEPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGSLLRAEIDPTENPAEYLRLAFTATFFAGITQATLGFFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKNFTKETDIISVMHSVWASVHHGWNWQTIVIGATFLGFLLFAKYIGKKNKKFFWVPAIAPLISVILSTFFVYITRADKKGVQIVKHIDKGINPSSASQIYFSGVYLLKGFKIGVVAGLIALTEAVAIGRTFASMKDYQLDGNKEMVALGAMNIVGSMTSCYVATGSFSRSAVNYMAGCKTAVSNIVMSCVVFLTLEFITPLFKYTPNAILASIIISAVIGLIDYDAAILIWKIDKFDFVACMGAFFGVVFKSVEIGLLIAVAISFAKILLQVTRPRTAILGKLPRTTVYRNIQQYPEATKIPGLLIVRIDSAIYFSNSNYVKERILRWLTDEEEHLKKANLPRVQFLIVEMSPVTDIDTSGIHALEELHRSLLKRDVKLVLANPGQVVIDKLHASKFADDIGEDKIFLTVGDAVVTCSPKLAEEV* 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4062209 4068891 + Vvi18g369 Vvi18g369 780072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g369 658 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Vvi18g369 658 Pfam STAS domain 528 646 IPR002645 -
Vvi18g369 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Vvi18g369 658 SUPERFAMILY SpoIIaa-like 529 650 IPR036513 -
Vvi18g369 658 MobiDBLite consensus disorder prediction 1 21 - -
Vvi18g369 658 Gene3D STAS domain 507 653 IPR036513 -
Vvi18g369 658 MobiDBLite consensus disorder prediction 1 32 - -
Vvi18g369 658 PANTHER SULFATE TRANSPORTER 1.3 13 658 - -
Vvi18g369 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Vvi18g369 658 TIGRFAM sulP: sulfate permease 82 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi18g369 658 PANTHER SULFATE TRANSPORTER 13 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi18g369 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g1048 Vvi18g369 ECH
Vvi7g1094 Vvi18g369 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g369 K17470 - vvi:100233023 1186.79