Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g371 ATGAATATTGTTGGTTCAATGACTTCTTGCTATGTGGCAACAAGTTCCTTCTCTCGTTCAGCCGTAAACTACATGGCCCGATGCCAAACTACAGTCTCTAACATTGTGATGTCCTGTGTTGTTTTTCTAACCTTGGAATTCATCACACCTCTTTTCAAATACACCCCAAATGCCATTCTTGCTTCCATCATTATATCTGCTGTGATTGGCCTAATTGACTATGAGGCAGCAATTCTGATATGGAAGATTGATAAATTTGATTTTGTTGCTTGCATGGGAGCTTTCTTTGGCGTGGTTTTTTCCTCTGTTGAGATTGGTCTCTTAATTGCGGTTTCCATATCCTTTGCCAAGATCCTCCTACAATTTACAAGGCCACGGACTGCAATTCTTGGGAGGCTCCCTAGGACAACCGTTTACAGGAACATCCAACAATATCCAGAGGCAACTAAAATTCCAGGATTGTTAATTGTGAGGGTTGATTCTGCAATCTACTTTTCCAATTCTATCTATGTCAAGGAAAGGATACTGAGATGGCTGACTGATGAGGAAGAACAGTTGAAAGAAGCCAACCTACCAAGAGTCCAGTTTTTGATTGTTGAGATGTCCCCTGTAACTGACATAGACACCAGTGGCATCCATGCATTGGAAGAGTTACACAGGAGTCTCCTAAAGAGAGATGTCAAAGAAAATACATCCACGCTAATTGCCCTATATGTTTCGAAAAATCTACTTTGTAAAAAACTTAACACGCAGAATCACATTACGTTCTCTTTGGAAACAATTCATGTCTATTATATATTGTATGAGCTTAGAGATTACCTGATTGAAAGCTCCCAGTTGTTGTGCATCTGGTTCTGGCAAATCCTGGGCAAGTGGTGA 879 40.5 MNIVGSMTSCYVATSSFSRSAVNYMARCQTTVSNIVMSCVVFLTLEFITPLFKYTPNAILASIIISAVIGLIDYEAAILIWKIDKFDFVACMGAFFGVVFSSVEIGLLIAVSISFAKILLQFTRPRTAILGRLPRTTVYRNIQQYPEATKIPGLLIVRVDSAIYFSNSIYVKERILRWLTDEEEQLKEANLPRVQFLIVEMSPVTDIDTSGIHALEELHRSLLKRDVKENTSTLIALYVSKNLLCKKLNTQNHITFSLETIHVYYILYELRDYLIESSQLLCIWFWQILGKW* 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4069910 4071971 + Vvi18g371 Vvi18g371 780074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g371 292 Pfam Sulfate permease family 1 92 IPR011547 GO:0016021
Vvi18g371 292 PANTHER SULFATE TRANSPORTER 1.2-LIKE 1 228 - -
Vvi18g371 292 SUPERFAMILY SpoIIaa-like 146 227 IPR036513 -
Vvi18g371 292 CDD STAS_SulP_like_sulfate_transporter 145 228 - -
Vvi18g371 292 ProSiteProfiles STAS domain profile. 144 228 IPR002645 -
Vvi18g371 292 Pfam STAS domain 145 228 IPR002645 -
Vvi18g371 292 PANTHER SULFATE TRANSPORTER 1 228 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vvi18g371 292 Gene3D STAS domain 124 255 IPR036513 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g371 K17470 - egr:104419925 385.185