Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g41 ATGGAAGGGAAGGCAGAGAAGGAGAGAGTGTGCGTGACTGGTGCAGGAGGGTATATAGCTTCGTGGGTCGTCAAGTTTCTCCTCTCAAAGGGTTATATTGTTCATGGAACGGTCAGAGACCCAAGTGATGAAAAGAACAGCCATCTAAAGAAATTGGAGAAGGCTTTGGAAAATCTTCAACTTTTTAAGACAGATTTGCTGGACTATGAAGGCCTTTGCGCTGCCTTTGCTGGATGCTCTGGGGTTTTCCATGTTGCCAGCCCAGTCCCTATTGGCCCAATATCTAACCCTGAGGTGGAACTGATTGAACCAGCTGTAGTGGGCACGCGTAATGTCTTAAGCGCATGTGAGAAGGCCAAAGTGAAGAAAGTTGTGGTTGTTTCATCCGCTGGTGCTGTCGCCATGACCCCCAACAGGCCTAAGGATCGGCCCATGGACGAAGAATGTTGGTCTGACCTTGAATATTGCAAGGCAACTCAGAATTATTATTGCCTTGCCAAAACAATAGCAGAGAGTGAAGCCCTGGAGCATACAAAGAAAAGCGAGCTCAACATTGTAACAGTTTGTCCATCCTTTGTATTCGGGCCAATGCTGCAATCCACAATGAATGGCAGCTGCTTGCTTCTCCTATCATTTATGAAAGATGGTGGCGAATCAGTGAAAAATATTGTTTATCCTGTTGTTGATGTGCGCGATGTGGCTGAATCAATTCTGCTGGCATATGAGAACCCTAATGCAGTGGGAAGATACATATGCTCAGCACACTCAATCCAAGCTCAAGCTTTAGCAGAGAAGTTGAAGGGCATGTATCCCAACTACAACTACCCTAAAAGTTACATTGAAGATGAGAAGGATGTTGAGTTAAGTTCAGAGAAGTTGCAGAGGCTGGGGTGGAAGTATAGGCCGTTGGAAGAGACACTTGTGGATGCAGTTAGAAACTATGAAGAGAATGGCTTCTTGGTTGAACACTAG 972 45.68 MEGKAEKERVCVTGAGGYIASWVVKFLLSKGYIVHGTVRDPSDEKNSHLKKLEKALENLQLFKTDLLDYEGLCAAFAGCSGVFHVASPVPIGPISNPEVELIEPAVVGTRNVLSACEKAKVKKVVVVSSAGAVAMTPNRPKDRPMDEECWSDLEYCKATQNYYCLAKTIAESEALEHTKKSELNIVTVCPSFVFGPMLQSTMNGSCLLLLSFMKDGGESVKNIVYPVVDVRDVAESILLAYENPNAVGRYICSAHSIQAQALAEKLKGMYPNYNYPKSYIEDEKDVELSSEKLQRLGWKYRPLEETLVDAVRNYEENGFLVEH* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 509644 513093 + Vvi18g41 Vvi18g41 779744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g41 323 Pfam NAD dependent epimerase/dehydratase family 10 246 IPR001509 -
Vvi18g41 323 Gene3D - 2 323 - -
Vvi18g41 323 PANTHER REDUCTASE, PUTATIVE-RELATED 1 321 - -
Vvi18g41 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 321 - -
Vvi18g41 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 315 IPR036291 -
Vvi18g41 323 CDD FR_SDR_e 10 298 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g41 - - vvi:100247939 640.188