Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g412 ATGGAGGAAAGAGAGCAACAGGTTTACTTGGCTAGGCTTGCTGAGCAAGCTGAGAGATATGATGAGATGGTTGAAGCAATGAAGAAAGTTGCTAAATTGGATGTGGAACTGACAGTGGAGGAGAGGAATCTGGTATCTGTTGGATATAAAAATGTTATTGGGGCAAGAAGGGCATCATGGAGGATATTGTCTTCCATTGAACAGAAGGAGGAGACCAGGGGAAATGAGCAAAATGCAAAAAGGATAAAGGATTACAGACAAAGGGTTGAAGATGAGCTGTCAAAGATCTGCAATGACATATTGTCCGTCATTGATAATCATCTCATCCCATCATCCTCAACAGGGGAATCAACTGTTTTCTACTATAAGATGAAAGGAGATTACTACCGATATTTAGCTGAATTCAAAGCAGGGAATGACCGTAAAGAAGCTGCTGATCAGTCACTTAAGGCCTATGAGGCTGCCACCAGTACAGCTGCCTCAGATCTGCCGCCTACTCATCCAATCAGACTTGGGCTGGCTTTGAACTTTTCTGTCTTCTACTATGAAATTTTGAACTCCCCAGAGAGGGCTTGCCACCTTGCAAAACAAGCTTTTGATGAGGCTATTGCAGAACTTGATAGCCTGAATGAAGAATCATACAAGGATAGTACCCTTATTATGCAGCTTCTTCGGGATAATCTCACATTATGGACCTCAGATCTGCCAGAGGAGGGAGGTGAGACATCTAAAGCTGATGAACCTCAAGCAGAGAGTTAG 759 43.21 MEEREQQVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEETRGNEQNAKRIKDYRQRVEDELSKICNDILSVIDNHLIPSSSTGESTVFYYKMKGDYYRYLAEFKAGNDRKEAADQSLKAYEAATSTAASDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDSTLIMQLLRDNLTLWTSDLPEEGGETSKADEPQAES* 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4453246 4457940 - Vvi18g412 Vvi18g412 780115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g412 252 Pfam 14-3-3 protein 10 232 IPR023410 -
Vvi18g412 252 PIRSF 14-3-3 1 247 IPR000308 -
Vvi18g412 252 Coils Coil 192 212 - -
Vvi18g412 252 PRINTS 14-3-3 protein zeta signature 36 65 IPR000308 -
Vvi18g412 252 PRINTS 14-3-3 protein zeta signature 85 109 IPR000308 -
Vvi18g412 252 PRINTS 14-3-3 protein zeta signature 116 138 IPR000308 -
Vvi18g412 252 PRINTS 14-3-3 protein zeta signature 151 177 IPR000308 -
Vvi18g412 252 PRINTS 14-3-3 protein zeta signature 178 204 IPR000308 -
Vvi18g412 252 PRINTS 14-3-3 protein zeta signature 205 234 IPR000308 -
Vvi18g412 252 Gene3D - 1 244 IPR036815 -
Vvi18g412 252 SMART 1433_4 4 245 IPR023410 -
Vvi18g412 252 Coils Coil 10 30 - -
Vvi18g412 252 ProSitePatterns 14-3-3 proteins signature 2. 214 233 IPR023409 -
Vvi18g412 252 ProSitePatterns 14-3-3 proteins signature 1. 42 52 IPR023409 -
Vvi18g412 252 SUPERFAMILY 14-3-3 protein 1 234 IPR036815 -
Vvi18g412 252 PANTHER 14-3-3-LIKE PROTEIN GF14 OMICRON 2 249 - -
Vvi18g412 252 PANTHER 14-3-3 PROTEIN 2 249 IPR000308 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g888 Vvi18g412 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g412 K06630 - vvi:100247183 495.738