Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g42 ATGGCGGAGAAGGGCAAAGTGTGTGTAACAGGCGCAGGAGGGTACGTTGCTTCATGGGTCGTCAAGCTTCTTCTCTCCAAGGGCTACATCGTCCATGGAACCGTTAGAGAACCCAGTGATGGAAAGTACTCTCATTTGAAGAAACTTGAGAAGGCATCTGGGAACCTGAAACTCTTTAAGGCAGACTTGCTGGAGTACAACACGCTTTGTTCTGCCATTGCAGGATGCGATGGAGTGTTTCATGTCGCCAGTCCCGTCCCCCCTACCACTGTAGTACCAAATCCTGAGGTAGAACTAATGGAGCCTGCTGTGAAGGGCACACTTAATGTACTGAAGGCATGTACTGAAGCAAAAGTTAAACGGGTTGTTGTTGTGTCCTCTGGATCTGCTGTCATGAGGAATCCTAGGTGGCCCAAGGGTAAAGTGAAGGATGAGACTTGCTGGTCTGACAAAGAATATTGCCGAACAACTGAGAATTGGTATTGTCTTTCTAAAACAGAAGCAGAAACCGAGGCCTTTGAGTATGCCAAAAAAAGTGGGCTTGATGTTGTGAGAGTTTGCCCTACCCTCGTTCTAGGGCCAATCCTGCAGTCCACAATCAATGCAAGTAGTTTGGTCCTCATTAAACTTTTGAAAGAAGGATATGAGTCACTGGAAAACAAGCATCGTATGATAGTAGACGCACGTGATGTAGCTGAAGCTCTGCTTCTTGCTTATGAGCAGCCCGAAGCTGAAGGAAGATACATATGCACAGCACACATGATCAAGATGCAGGATTTGGTGGAGAATTTAAGGAGCATTTACCCCTATTACAATTATCCAAAGAATTTTACAGAGGGAGAGGAAACAGAGAACCTGAGCTCAGAGAAACTGCAGAGATTGGGATGGAATTACAGGCCACTGGAAGAAACCCTAGTTGACTCGATCAAAAGCTACAAAGAGGCTGGCATCTTGGATTAA 960 45.94 MAEKGKVCVTGAGGYVASWVVKLLLSKGYIVHGTVREPSDGKYSHLKKLEKASGNLKLFKADLLEYNTLCSAIAGCDGVFHVASPVPPTTVVPNPEVELMEPAVKGTLNVLKACTEAKVKRVVVVSSGSAVMRNPRWPKGKVKDETCWSDKEYCRTTENWYCLSKTEAETEAFEYAKKSGLDVVRVCPTLVLGPILQSTINASSLVLIKLLKEGYESLENKHRMIVDARDVAEALLLAYEQPEAEGRYICTAHMIKMQDLVENLRSIYPYYNYPKNFTEGEETENLSSEKLQRLGWNYRPLEETLVDSIKSYKEAGILD* 320
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 514834 520024 + Vvi18g42 Vvi18g42 779745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g42 319 Gene3D - 1 319 - -
Vvi18g42 319 Pfam NAD dependent epimerase/dehydratase family 7 245 IPR001509 -
Vvi18g42 319 CDD FR_SDR_e 7 296 - -
Vvi18g42 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 313 IPR036291 -
Vvi18g42 319 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 3 318 - -
Vvi18g42 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 318 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g42 - - vvi:100253060 622.854