Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g442 ATGGTGGAGTTCATGGAGAAGGTCTCGGCCGCCGTGGATTCCGAGGAACTCACTAAGGAGGAGAGCCGCGGCAACGAGGACCACATGAAGGGCGATTATCATCGCTATCTGGCCGAGTTTAAAACTGGAGCCGAGCGCAAGGAGGCGGCTGAGAGTACCCTCACTGCCTATAAATCTGCTCAGGATATTGCAAACGCAGAACTGGCTCCAACTCATCCAATCCGGCTCGGACTGGCTCTCAACTTCTCTGTGTTTTACTACGAGATTCTGAATTCTCCCGATCGAGCTTGTAACCTTGCGAAACAGGCATTTGATGAAGCCATTGCTGAATTGGATACCTTGGGTGAGGAGTCATACAAGGATAGCACTTTGATAATGCAACTTCTTCGTGACAATCTCACTCTGTGGACCTCAGATATGCAGGATGATGGGGCAGATGAGATTAAAGAAGCACCAAAGCGTGATGATGAACAGCAGTGA 480 49.79 MVEFMEKVSAAVDSEELTKEESRGNEDHMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKRDDEQQ* 160
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 4742537 4745017 + Vvi18g442 Vvi18g442 780145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g442 159 PRINTS 14-3-3 protein zeta signature 21 43 IPR000308 -
Vvi18g442 159 PRINTS 14-3-3 protein zeta signature 56 82 IPR000308 -
Vvi18g442 159 PRINTS 14-3-3 protein zeta signature 83 109 IPR000308 -
Vvi18g442 159 PRINTS 14-3-3 protein zeta signature 110 139 IPR000308 -
Vvi18g442 159 PANTHER 14-3-3 PROTEIN 28 156 IPR000308 -
Vvi18g442 159 SMART 1433_4 1 150 IPR023410 -
Vvi18g442 159 PANTHER 14-3-3 PROTEIN 6 28 156 - -
Vvi18g442 159 Gene3D - 26 150 IPR036815 -
Vvi18g442 159 Pfam 14-3-3 protein 18 137 IPR023410 -
Vvi18g442 159 SUPERFAMILY 14-3-3 protein 19 146 IPR036815 -
Vvi18g442 159 ProSitePatterns 14-3-3 proteins signature 2. 119 138 IPR023409 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g442 K06630 - twl:120010991 273.478