Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi18g466 | ATGGCTTCCCCATCCTTGTTGTCCTTATTCTTCATATTTTCGCTTCTACTGGGGATGGCACATGCACATTATCTATCCCCCAACTTCTATGCAAGATCATGCCCTAGGGCTCTCCCTACCATTCGAACTGCAGTAAACAAAGCAGTGGCCAAAGAGAAACGCATGGGGGCCTCATTGCTCCGCCTCCATTTCCATGATTGCTTCGGATGTGATGCTTCTATATTATTGGATGACACTGCAACCTTTACTGGAGAGAAGACAGCAGGACCAAATAACAACTCTGTGAGAGGATATGAGGTGATCGACACCATTAAATCTCAAGTGGAAAGTTTGTGCCCTGGAGTTGTCTCTTGTGCAGATATTGTAGCAGTGGCAGCTCGTGACTCGGTTGTCGCTTTGGGTGGCCCAACATGGACTGTGCGATTAGGCAGAAGAGATTCAACCACGGCGAGTTTCAGTGCTGCTCGCACCGACCTCCCTGGCCCGAACTTAAATCTCAGTCAGCTTATATCTGCCTTCTCCAAGAAGGGCTTGACTACTAAGGAAATGGTGGTTCTCTCAGGAACTCATACCATAGGTAAAGCAAGATGCACAAGTTTTCGAAATCATATTTACAACGACACCGACATCGATCCAGCATTTGCAGCATCAAAACAGAAAATCTGCCCAAGATCGGGTGGAGATGATAATCTATCTCCTCTGGATGGAACTACTACTGTTTTCGATAATGTTTATTTTAGGGGTTTGAAGGAAAAGAAGGGTCTGTTGCACTCAGACCAGGAACTCTACAACGGTGGCTCCACAGATTCCATAGTTGAAACCTACAGCATCAACACTGCCACTTTCTTCAGGGATGTGGCCAACGCCATGGTTAAGATGGGAAATATTAGTCCTTTAACCGGAACTAATGGACAGATTAGGACCAACTGCAGGAAAATTCAATGCATAGGACCAACCCCCATAGAAATAAGAAACCCCACAAATTTAACCAAGAGCCTTTCAATCATTGGCACTATCCCCTTGCAAGCATCGAGTTCCAAGAAAATCCATCAAATAAAAAAAATCATTTTTTCAAAAACTATATATCCAAATAAAAACCTTGAAATTCAAATATATAATATCATAAATATAAACACCAAGCGTGGGTCAGGCTTGCACCACTTGCAACTCCAATCAACCCAATCAAACAAAACAGCCAACCCACTCCTTACCCTACCACATTTTGCTACAATATTTTCTCTCTATATAAAACACGATAACGACACCACAATAAAAAACCCTAATTACAAAAGACGGTTCCACAATGAGTTAAATGGACCCAAAAATCATATTTGGCTATAA | 1341 | 42.65 | MASPSLLSLFFIFSLLLGMAHAHYLSPNFYARSCPRALPTIRTAVNKAVAKEKRMGASLLRLHFHDCFGCDASILLDDTATFTGEKTAGPNNNSVRGYEVIDTIKSQVESLCPGVVSCADIVAVAARDSVVALGGPTWTVRLGRRDSTTASFSAARTDLPGPNLNLSQLISAFSKKGLTTKEMVVLSGTHTIGKARCTSFRNHIYNDTDIDPAFAASKQKICPRSGGDDNLSPLDGTTTVFDNVYFRGLKEKKGLLHSDQELYNGGSTDSIVETYSINTATFFRDVANAMVKMGNISPLTGTNGQIRTNCRKIQCIGPTPIEIRNPTNLTKSLSIIGTIPLQASSSKKIHQIKKIIFSKTIYPNKNLEIQIYNIININTKRGSGLHHLQLQSTQSNKTANPLLTLPHFATIFSLYIKHDNDTTIKNPNYKRRFHNELNGPKNHIWL* | 447 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
18 | 5092139 | 5102291 | + | Vvi18g466 | Vvi18g466 | 780169 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi18g466 | 446 | ProSitePatterns | Peroxidases active site signature. | 56 | 67 | IPR019794 | GO:0004601 | |
Vvi18g466 | 446 | Gene3D | Peroxidase, domain 2 | 160 | 293 | - | - | |
Vvi18g466 | 446 | PRINTS | Haem peroxidase superfamily signature | 56 | 70 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Haem peroxidase superfamily signature | 116 | 133 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Haem peroxidase superfamily signature | 134 | 146 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Haem peroxidase superfamily signature | 182 | 197 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Haem peroxidase superfamily signature | 234 | 249 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PANTHER | PEROXIDASE 72-RELATED | 18 | 314 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | CDD | secretory_peroxidase | 25 | 313 | IPR033905 | GO:0004601|GO:0042744 | |
Vvi18g466 | 446 | PANTHER | PEROXIDASE | 18 | 314 | - | - | |
Vvi18g466 | 446 | ProSiteProfiles | Plant heme peroxidase family profile. | 24 | 314 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | Pfam | Peroxidase | 42 | 276 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | Gene3D | - | 28 | 311 | - | - | |
Vvi18g466 | 446 | SUPERFAMILY | Heme-dependent peroxidases | 25 | 312 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 182 | 192 | IPR019793 | - | |
Vvi18g466 | 446 | PRINTS | Plant peroxidase signature | 34 | 53 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Plant peroxidase signature | 58 | 78 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Plant peroxidase signature | 96 | 109 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Plant peroxidase signature | 115 | 125 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Plant peroxidase signature | 134 | 149 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Plant peroxidase signature | 181 | 193 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Plant peroxidase signature | 232 | 247 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Plant peroxidase signature | 248 | 265 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Vvi18g466 | 446 | PRINTS | Plant peroxidase signature | 288 | 301 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi18g466 | K00430 | - | vvi:100232945 | 610.527 |