Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g467 ATGGCTTCCCTATCCTTGTTTTCCTTATTCTGTGTGTTTTCGTTTCTATTGGGGATGGCACATGCACAGCTCTCCTCCAACTTCTATGCAAGTTCATGTCCTAAGGCTCTCTCTACCATTCGAGCTGCAGTAAACAATGCAGTGGCCAAAGAGCGCCGCATGGGAGCCTCATTGCTTCGCCTCCATTTCCATGATTGCTTTGTATTGGGATGTGATGCTTCTATATTATTGGACGACACTGCAAGCTTTACCGGAGAGAAGACAGCAGGACCAAATAAGGACTCTGTGCGAGGATATGAGGTGATCGACACCATTAAATCTCAAGTGGAAAGTTTGTGCCCTGGGGTTGTTTCTTGTGCAGATATTGTAGCAGTGGCAGCTCGTGACTCTGTTGTTGCTTTGGGTGGCCCAACATGGACCCTGCAATTAGGCAGAAGAGATTCAACCACGGCGAGTTTGAGTACTGCTAACAGTGACCTCCCTGGCCCGGCCTCAGATCTTAGTACTCTTATATCTAGATTCTCCAACAAGGGCTTCACTACTAAGGAAATGGTGGCTCTCTCAGGAACTCATACCATAGGTAAAGCAAGATGCACAAGCTTTCGGAGTCGAATTTACAACGAGACCAACATCGATGCAGCATTTGCAACATCAAAACAGAAAATCTGCCCAAGCACGGGTGGAGATAATAATCTGTCTGATCTGGATGAAACGACTACTGTTTTCGATAATGTTTATTTCAGAAATTTGAAGGCGAAGAAGGGTCTGTTGCACTCAGACCAACAACTCTATAATGGTGGTTCCACAGATTCCATAGTTGAAACCTACAGCACCAACTCTGCCACTTTCTTTACGGATAAAAAGAAACGAACGGGAACGAAAACACCACAGGATATATATGTTTTTTCTAACCCAAAACTTCATTTTAACCCCTTCAAGGTTTTGTTTATGTCGAGCCAAACTCCGTTGGGCACAGATTGGGCCTCCAAACTGGACTCTCAACTCCAAACCAACACAAACATACAAAAACAGCCGACCCACACTCCTCAGCCGACATCAATGTTAATCCTACACTACTACGTAAAATTTAAAGCGTCAAACCCCACCAGACTGGTCAATTAA 1122 44.74 MASLSLFSLFCVFSFLLGMAHAQLSSNFYASSCPKALSTIRAAVNNAVAKERRMGASLLRLHFHDCFVLGCDASILLDDTASFTGEKTAGPNKDSVRGYEVIDTIKSQVESLCPGVVSCADIVAVAARDSVVALGGPTWTLQLGRRDSTTASLSTANSDLPGPASDLSTLISRFSNKGFTTKEMVALSGTHTIGKARCTSFRSRIYNETNIDAAFATSKQKICPSTGGDNNLSDLDETTTVFDNVYFRNLKAKKGLLHSDQQLYNGGSTDSIVETYSTNSATFFTDKKKRTGTKTPQDIYVFSNPKLHFNPFKVLFMSSQTPLGTDWASKLDSQLQTNTNIQKQPTHTPQPTSMLILHYYVKFKASNPTRLVN* 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5102793 5106770 + Vvi18g467 Vvi18g467 780170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g467 373 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 Gene3D Peroxidase, domain 2 161 286 - -
Vvi18g467 373 Pfam Peroxidase 41 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PANTHER PEROXIDASE 15 288 - -
Vvi18g467 373 Gene3D - 27 160 - -
Vvi18g467 373 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Vvi18g467 373 CDD secretory_peroxidase 23 286 IPR033905 GO:0004601|GO:0042744
Vvi18g467 373 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Vvi18g467 373 SUPERFAMILY Heme-dependent peroxidases 23 286 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 ProSiteProfiles Plant heme peroxidase family profile. 23 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g467 373 PANTHER PEROXIDASE 72-RELATED 15 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g467 K00430 - vvi:100257440 558.91