Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g485 ATGGTCAAATTCATGGAAAAGCTTGTAATCGGGTGGACCTCCATGTCGGAGCTCACCGAGGAGAGTCGCAAGAACGAGGAGCATGTGGCTCTTTCCAAGGTGTTTTACATGAAGATGAAGGGGGACTACCACAGGTATTTAGCTGAGTTCAAGGTTGGGAATGAGAAGAAGGATGCCGCCGAGGAGACTATGTTAGCATACAAGTCTGCTCAGGATATTGCTCTAGCTGATCTGGCCCCGACTCATCCAATAAGGTTGGGCTTGGCGCTCAATTTCTCTGTGTTTTACTATGAGATTCTCAATTCATCGGATAAGGCCTGTAGCATGGCCAAACAGGCATTTGAGGAAGCCATTGCTGAGTTGGACACTCTGGGAGAAGAATCATACAAGGACAGCACTCTTATCATGCAACTGCTGAGGGACAATCTTACTCTTTGGACTTCAGATGCTCAGGACCAGTTGGATGAGCCATAG 474 47.68 MVKFMEKLVIGWTSMSELTEESRKNEEHVALSKVFYMKMKGDYHRYLAEFKVGNEKKDAAEETMLAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDEP* 158
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5477435 5481168 - Vvi18g485 Vvi18g485 780188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g485 157 PANTHER BNAC02G00320D PROTEIN 32 153 - -
Vvi18g485 157 SUPERFAMILY 14-3-3 protein 13 149 IPR036815 -
Vvi18g485 157 SMART 1433_4 1 156 IPR023410 -
Vvi18g485 157 Pfam 14-3-3 protein 30 147 IPR023410 -
Vvi18g485 157 PANTHER 14-3-3 PROTEIN 32 153 IPR000308 -
Vvi18g485 157 PRINTS 14-3-3 protein zeta signature 31 53 IPR000308 -
Vvi18g485 157 PRINTS 14-3-3 protein zeta signature 66 92 IPR000308 -
Vvi18g485 157 PRINTS 14-3-3 protein zeta signature 93 119 IPR000308 -
Vvi18g485 157 PRINTS 14-3-3 protein zeta signature 120 149 IPR000308 -
Vvi18g485 157 ProSitePatterns 14-3-3 proteins signature 2. 129 148 IPR023409 -
Vvi18g485 157 Gene3D - 12 156 IPR036815 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g485 K06630 - vvi:100854545 278.1