Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g505 ATGAAAGGTAAACGTCTAGCAAGTAGTAAAAGTCATGTTGTCAAGGAAGAGGAAGAGAAAGCAGCTGATCAATTGAGGGGAAAGGTCTTGCCTGGGGATTTAATATGGGTCAGGCTCCGTGGGTTATCATGGTGGCCAGCTCAGGTTGTTAATGAGAATGCTGTGAGTAGAAGCAATAAACCTGGTAATAGATCAGAGGATGAAGTTCTTGTTCGTGTGTATGGAACCTATAACTACTTGTATGTGGATCCAATGAAATGTCGTTCTGAATTTGAGAATATACTCAAGCAGAATAATTGTAGTTACAGAGAAATATTTCAGAAGGCTCTGGAGCAGGATCTTCCTAGTGCTAAGTGTGGTAGATCGAAGGGGCGAGGATCCAAATCCAAAGAAAGTGCTGAGGAAGTGGAAAGCAAAACCTTTAAAGAGAATGGGGAACTGAAGAAACTCAAACTGAAGAGGCCAAGTGCCAAGTGGGAAGCAAAATGCAAAACCTCTAAGCAAAATGGGGTGCAGAAGGAACCAAAGCCAACTAGCCTGAGCAATGAAGATGATACAAAATGCAGAACCTCTCAGCATAGTGGGGTGCAAAAGAAACACAATCCAAATAGCTTAAGCACTGATGCTAAAAAAGAAGCAAAAAGCAAAACTGTTAAGGATGCAGGGTTGCAGAAAAAACTTGTGCCAAATAGCCCAAGTGCACGCAAGGAAGCGAAAGGAAAAACTCCTAAGCAAGATGTGGTGCAGAAGAAACTTGAGTTGATTGATGCAAAAGAGCAAAGCAATACCCCTACGCAAGATGGTGTACTGCAAAAAAAACGCAGGCCAAGTAGCCAATGCTATGAGGAGGCATCAGAAAGTAAAACCTTGAAACAAGATGGGGCACAAAAGAAACTCAAGCTAAATAGCCCAAGCACTGAGAAGGAAGCAAAAAGGAAAACCTCTAAAAAGGATGACATGCTGAAGAAGCTCAATTCGAATAGCCCATGCACGGCAACATCTTCAACAAGGAAGACTAGTGAAAAAATATCTTCAAGGAAGTCTCACATACTCAATGCACGGAGAATGAGAGTTATGCGGAGCCTTGGTCTCACTGCTCCTTCTGGATCTCCGTTTGATAGAAATGGACATACTTAG 1137 42.39 MKGKRLASSKSHVVKEEEEKAADQLRGKVLPGDLIWVRLRGLSWWPAQVVNENAVSRSNKPGNRSEDEVLVRVYGTYNYLYVDPMKCRSEFENILKQNNCSYREIFQKALEQDLPSAKCGRSKGRGSKSKESAEEVESKTFKENGELKKLKLKRPSAKWEAKCKTSKQNGVQKEPKPTSLSNEDDTKCRTSQHSGVQKKHNPNSLSTDAKKEAKSKTVKDAGLQKKLVPNSPSARKEAKGKTPKQDVVQKKLELIDAKEQSNTPTQDGVLQKKRRPSSQCYEEASESKTLKQDGAQKKLKLNSPSTEKEAKRKTSKKDDMLKKLNSNSPCTATSSTRKTSEKISSRKSHILNARRMRVMRSLGLTAPSGSPFDRNGHT* 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 5674195 5679787 - Vvi18g505 Vvi18g505 780208

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g505 378 PANTHER OS08G0477800 PROTEIN 1 378 - -
Vvi18g505 378 MobiDBLite consensus disorder prediction 162 177 - -
Vvi18g505 378 MobiDBLite consensus disorder prediction 237 257 - -
Vvi18g505 378 MobiDBLite consensus disorder prediction 324 339 - -
Vvi18g505 378 Gene3D - 16 121 - -
Vvi18g505 378 MobiDBLite consensus disorder prediction 204 221 - -
Vvi18g505 378 MobiDBLite consensus disorder prediction 302 323 - -
Vvi18g505 378 ProSiteProfiles PWWP domain profile. 31 93 IPR000313 -
Vvi18g505 378 PANTHER ALDOLASE-RELATED 1 378 - -
Vvi18g505 378 MobiDBLite consensus disorder prediction 158 378 - -
Vvi18g505 378 MobiDBLite consensus disorder prediction 276 295 - -
Vvi18g505 378 MobiDBLite consensus disorder prediction 124 139 - -
Vvi18g505 378 Pfam PWWP domain 32 112 IPR000313 -
Vvi18g505 378 MobiDBLite consensus disorder prediction 178 192 - -
Vvi18g505 378 MobiDBLite consensus disorder prediction 258 273 - -
Vvi18g505 378 MobiDBLite consensus disorder prediction 116 139 - -
Vvi18g505 378 SUPERFAMILY Tudor/PWWP/MBT 28 144 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g505 - - - vvi:100250519 711.835
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g505 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .