Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g575 ATGGCGGTCCCTGGGGGCCATCGGCAGCGAGGCAGGCCTCGAGCTCTGATCGGGGAACCAGTCCGACCCAGGGTTCCACTGAGGCGGTTGCTGAGAGTGGCATCGGTGGCCTGTGGAATACAGTTTGGTTGGGCTCTGCAGCTCTCCCTTCTCACGCCCTACGTGCAAGAGCTCGGAATTCCTCACGCCTGGTCCAGTATCATATGGCTTTGCGGTCCCCTCTCGGGTCTGCTGGTCCAGCCCCTCGTCGGACACCTCAGTGATCGCTGTAACAGCCGCTTTGGCCGCCGGAGGCCTTTCATCGTCGCCGGAGCTACGTCGATTGTCGTCGCCGTTCTGATAATCGGATTCTCGGCTGACATCGGGGGTTTGCTTGGTGACGGTGCCGACCGGAGGCCGAGGGCGGTGGCTACCTTTGTGGTAGGGTTTTGGTTATTGGATGTGGCTAATAACGTGACTCAAGGACCTTGTAGAGCTCTGCTAGCAGATCTGACCGAAAAGGATCATCGAAGGACAAGAGTGGCCAACGCGTATTTCTCACTATTCATTGCTGTCGGCAATGTCCTTGGCTTTGCTACCGGATCCTACAGTGGTTGGTTCAGGATTTTCTGGTTCACGAGCACCTCTTCATGTAATGCTGATTGTGCCAATCTCAAGTCTGCCTTTTTACTAGACATTATTTTTATTGCTATCACCACATATATAAGCATAACAGCAGCCCAGGAATTGCCTCTAAGTTCCAGCAGTCGATCCACTCACATTTCAGAAGAAATGGCAGAGTCAACCCATGCTCAAGAAGCTTTTCTTTGGGAACTATTTGGGACTCTTAGATATCTCTCAGGGTCTATTTGGATAATCCTGTTTGTAACTGCTTTGACTTGGATTGGATGGTTTCCTTTTCTTCTTTTTGATACTGATTGGATGGGTCGAGAAATTTATGGTGGCAAACCAAATGAAGGGCAGAATTATAATACTGGAGTTAGAATGGGTGCGCTCGGTCTGATGTTGAATTCAGTTGTTCTTGGAATAACTTCAGTGCTCATGGAGAAGCTCTGCAGGAAGTGGGGGGCTGGTTTTGTTTGGGGGCTATCAAATATTCTCATGTCTCTTTGCTTTCTATTAATGCTCATACTTTCTGCTGTGGTGAAACATATGGATTTTCTAGGTCATGATCTACCCCCAAGTGGTGTTGTGATTGCTGCACTGATTGTTTTTTCAATCCTTGGTATTCCATTGGCAATCACATATAGTGTTCCATATGCCTTGATATCCACACGAATTGAGTCCCTGGGACTAGGTCAAGGGTTATCAATGGGTGTTCTGAATTTGGCAATTGTAATTCCCCAGGTTATTGTGTCCCTAGGAAGTGGACCATGGGATCAACTTTTTGGTGGTGGCAACTCGCCATCCTTGGCTGTGGCAGCAGTTGCAGCATTCGCCAGTGGACTTGTAGCCATCTTGGCTATTCCTCGATCTAGTGCTGATAAATCCAGGGTCCACACATGA 1506 49.0 MAVPGGHRQRGRPRALIGEPVRPRVPLRRLLRVASVACGIQFGWALQLSLLTPYVQELGIPHAWSSIIWLCGPLSGLLVQPLVGHLSDRCNSRFGRRRPFIVAGATSIVVAVLIIGFSADIGGLLGDGADRRPRAVATFVVGFWLLDVANNVTQGPCRALLADLTEKDHRRTRVANAYFSLFIAVGNVLGFATGSYSGWFRIFWFTSTSSCNADCANLKSAFLLDIIFIAITTYISITAAQELPLSSSSRSTHISEEMAESTHAQEAFLWELFGTLRYLSGSIWIILFVTALTWIGWFPFLLFDTDWMGREIYGGKPNEGQNYNTGVRMGALGLMLNSVVLGITSVLMEKLCRKWGAGFVWGLSNILMSLCFLLMLILSAVVKHMDFLGHDLPPSGVVIAALIVFSILGIPLAITYSVPYALISTRIESLGLGQGLSMGVLNLAIVIPQVIVSLGSGPWDQLFGGGNSPSLAVAAVAAFASGLVAILAIPRSSADKSRVHT* 502
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 6693572 6703325 - Vvi18g575 Vvi18g575 780278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g575 501 SUPERFAMILY MFS general substrate transporter 28 491 IPR036259 -
Vvi18g575 501 TIGRFAM GPH_sucrose: sucrose/H+ symporter 25 494 IPR005989 GO:0005887|GO:0008515|GO:0015770
Vvi18g575 501 PANTHER SUGAR TRANSPORTER 8 499 - -
Vvi18g575 501 Gene3D MFS general substrate transporter like domains 27 488 IPR036259 -
Vvi18g575 501 CDD MFS_SLC45_SUC 30 487 - -
Vvi18g575 501 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 8 499 - -
Vvi18g575 501 Pfam MFS/sugar transport protein 43 288 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g575 K15378 - vvi:100232844 930.628