Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g605 ATGGCGCCATCCTTTGACTGGTGGACAAAGGAGAGTCACAGGGGGACGCCGGTTGTCGTCAAGATGGAGAACCCTAACTGGTCCATTGCGGAGCTGGAGGGCCCGTCGGATGACGATTTTCTTCTCGCCGGTTCGCCCAACACCAACAGGGACAAAGGCCGGGGCAAAAACGCCAGGCAGCTCACATGGGTTCTTCTCCTCAAAGCCCACAAGGCCGCCGGTTGTCTGACCTCCATTGCGTCGGCAATGTTCGGCCTCGCTGCCGCCGTGTTTCTGTGGTTATCTGTTGTGTTGCTGGTATTTGAGGTGGCAGCCTACTTCAAGGCTCCATATGGGGTTAAGGATATCTTCAATTCCTTATATTCTCGATGGGTTTTGATTCGGGTGGAGTACCTCGCTCCTCCTCTGCAATTCCTTGCCAATGCTTGTATAGTGCTTTTCCTTATACAGAGTGTGGATAGGCTAGTTCTTTGTTTGGGGTGTTTCTGGATCAAATTCAAGAAGATTAAACCGGTTCCTAAGGGGACTGTGGATCTTGAATCCGGTGATGGAAATGGTTACTTTCCCAGGGTTCTTGTTCAGATCCCCATGTGCAATGAAAAAGAGGTTTATCAGCAATCTATTGCAGCCTGCTGCAATTTGGACTGGCCAAAATCAAGCATACTAATCCAAGTTCTGGACGATTCAGATGACCCAGTGACACAGTTGATGATCAAAGAGGAGGTCACAAAATGGCAGCAAGAGGGCGCCCACATTTTGTACAGGCACCGGGTGATCAGAGACGGGTACAAGGCTGGTAATCTCAAGTCTGCTATGAATTGCAGTTATGTCAAGGACTATGAATTTGTGGCAATATTTGATGCAGATTTTCAGCCCACCCCTGATTTTCTGAAAAGAACAGTTCCACATTTCAAGGACAATGAAGAACTAGGGCTGGTTCAGGCAAGGTGGTCTTTTGTGAATAAGGATGAGAACCTTCTAACTAGGTTACAGAACATTAACTTGTCTTTTCATTTCGAAGTGGAGCAGCAAGTTAATGGAGTTTTCATCAATTTCTTTGGTTTCAACGGCACTGCTGGAGTGTGGAGGATAAAGGCATTAGAGGATTCTGGTGGTTGGTTGGAGAGGACCACTGTTGAGGACATGGATATTGCTGTTCGAGCTCATCTTCAGGGCTGGAAATTCATCTTCCTCAATGATGTGGAGTGCCAATGTGAACTGCCAGAGTCTTATGAAGCTTATAGGAAACAACAACACAGATGGCATTCTGGACCCATGCAGTTGTTTCGCCTATGTTTGCCTGATGTTATCCGATCCAAGATCAGTATTTGGAAGAAGGCAAATCTAATCTTCCTCTTCTTTCTCCTCAGAAAACTGATACTACCCTTCTATTCTTTCACCCTGTTCTGCATAATTCTCCCAATGACAATGTTCATCCCTGAGGCTGAGCTCCCATCATGGGTTGTATGTTACATTCCGGCAACTATGTCATTTCTCAACATCCTCCCTTCTCCAAAATCCTTCCCCTTCATTGTCCCCTATCTTCTCTTTGAGAACACCATGTCAGTGACCAAGTTCAATGCAATGATCTCAGGCCTATTCCAGCTGGGAAGTGCATATGAATGGGTTGTCACAAAGAAATCTGGACGCTCCTCTGAGGGTGATCTTGTCTCCCTAGTTGCAAAAGGCCCGAAGCATCAAAGGGGAAGCTCAGAGCCTAATATTGGGGAGATGGAGGAAACTTTACTGCAGGAACAAAAGGCCTCTAGGAAGAAAAAGCACAACAGGATTTATACAAAGGAGCTGGCATTGGCTTTCCTTCTTCTAACAGCTTCAGCAAGGAGCCTCCTCTCTGCTCAGGGGATCCACTTCTACTTCCTGCTATTTCAGGGCATATCATTTCTTCTGGTTGGTTTAGACTTGATTGGAGAGCAGGTTGAGTAA 1944 46.55 MAPSFDWWTKESHRGTPVVVKMENPNWSIAELEGPSDDDFLLAGSPNTNRDKGRGKNARQLTWVLLLKAHKAAGCLTSIASAMFGLAAAVFLWLSVVLLVFEVAAYFKAPYGVKDIFNSLYSRWVLIRVEYLAPPLQFLANACIVLFLIQSVDRLVLCLGCFWIKFKKIKPVPKGTVDLESGDGNGYFPRVLVQIPMCNEKEVYQQSIAACCNLDWPKSSILIQVLDDSDDPVTQLMIKEEVTKWQQEGAHILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLQGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDVIRSKISIWKKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEAELPSWVVCYIPATMSFLNILPSPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVAKGPKHQRGSSEPNIGEMEETLLQEQKASRKKKHNRIYTKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVE* 648
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7027038 7030753 + Vvi18g605 Vvi18g605 780308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g605 647 PANTHER - 89 646 - -
Vvi18g605 647 PANTHER - 5 90 - -
Vvi18g605 647 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 89 646 - -
Vvi18g605 647 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 5 90 - -
Vvi18g605 647 Pfam Glycosyl transferase family group 2 283 479 IPR001173 -
Vvi18g605 647 SUPERFAMILY Nucleotide-diphospho-sugar transferases 191 470 IPR029044 -
Vvi18g605 647 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 184 406 IPR029044 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g605 - - vvi:100242055 1244.57