Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g653 ATGGAGAGCTATCTCAACGACAACTTTGGGGGTGTGAAGCCCAAGAACTCTTCCGAGGAGGCCCTCCAGAGATGGAGGAAGCTTTGCTGGGTTGTTAAAAACCCTAAGCGAAGGTTCCGTTTCACTGCTAATCTCAGCAAGCGATTCGAAGCTCAAGCTATTCGACGCTCCAATCAGGAGAAGTTTAGAGTAGCAGTTCTAGTTTCACAGGCTGCGCTTCAGTTTATTCATGGTTTGTCCAGTGACTACGTTGCACCTGAGGAAGTAACAGCTGCAGGTTTTCAAATTTGTGCTGATGAGTTGGGATCAATTGTGGAAGGCCATGACTTAAAAAAGCTGAAAATTCATGGTGGGGTTCAGGGTATTGCAGAGAAGCTCTCCACATCAACCACCAATGGTATTCCTATGGCTGATGATCTGTTGAATAAAAGAAAGGAAATTTATGGAATTAATAAATTCACTGAAACCAAAGTCCCTGGTTTCTGGGTTTTTGTGTGGGAAGCCCTTCATGATATGACCCTTATGATACTTGCTGTTTGTGCCTTTGTGTCTCTTCTTGTTGGCATAATAATGGAAGGATGGCCAAAGGGTGCACATGATGGACTTGGAATCGTTGCAAGTATTCTGCTTAAGAAAAAGATTACAGTTCAGGTTACTAGAGATGGGCAGAGGCAAAAGATATCAATATATGATCTAGTTCCAGGTGATATTGTTCATCTTTCCATTGGAGATCAGGTCCCAGCTGATGGACTTTTTGTTTTAGGATTTTCTTTGTTGATAAATGAGTCCAGTTTGACAGGAGAGAGTGAGCCAGTTCATGTGAATTCCGAGAATCCTTTTCTCTTGTCTGGAACTAAAGTTCAGGATGGGTCATGCAAAATGCTTGTGACTACTGTTGGGATGAGAACCCAATGGGGTAAATTGATGGCAACTCTTAGTGAAGGAGGGGATGATGAGACCCCATTGCAGGTAAAACTGAATGGAGTGGCAACCATCATTGGAAAACTCGGCCTGTTTTTTGCTGCTGTGACTTTTGCTGTTCTGGTGCAAGGATTGTTCAGCCGCAAACTCCGAGAGGGGTCCCACTGGAGCTGGTCTGGAGATGATGCACTGGAAATGTTGGAATTCTTTGCTGTTGCTGTTACAATTGTTGTGGTCGCAGTTCCTGAGGGGTTGCCCTTGGCTGTGACATTGAGCCTTGCTTTTGCCATGAAGAAGATGATGCATGATAAGGCACTTTTTCTGCTCTGGAATTCCTGA 1260 44.21 MESYLNDNFGGVKPKNSSEEALQRWRKLCWVVKNPKRRFRFTANLSKRFEAQAIRRSNQEKFRVAVLVSQAALQFIHGLSSDYVAPEEVTAAGFQICADELGSIVEGHDLKKLKIHGGVQGIAEKLSTSTTNGIPMADDLLNKRKEIYGINKFTETKVPGFWVFVWEALHDMTLMILAVCAFVSLLVGIIMEGWPKGAHDGLGIVASILLKKKITVQVTRDGQRQKISIYDLVPGDIVHLSIGDQVPADGLFVLGFSLLINESSLTGESEPVHVNSENPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKLGLFFAAVTFAVLVQGLFSRKLREGSHWSWSGDDALEMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMHDKALFLLWNS* 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7611416 7618197 + Vvi18g653 Vvi18g653 780356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g653 419 PANTHER CATION TRANSPORTING ATPASE 3 210 - -
Vvi18g653 419 PANTHER CATION TRANSPORTING ATPASE 211 413 - -
Vvi18g653 419 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 413 IPR023298 -
Vvi18g653 419 PANTHER CALCIUM-TRANSPORTING ATPASE 3 210 - -
Vvi18g653 419 PANTHER CALCIUM-TRANSPORTING ATPASE 211 413 - -
Vvi18g653 419 Gene3D - 17 77 - -
Vvi18g653 419 Gene3D - 202 288 - -
Vvi18g653 419 Pfam Cation transporter/ATPase, N-terminus 117 184 IPR004014 -
Vvi18g653 419 Pfam E1-E2 ATPase 213 408 - -
Vvi18g653 419 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Vvi18g653 419 Gene3D - 167 419 - -
Vvi18g653 419 SUPERFAMILY Calcium ATPase, transduction domain A 214 310 IPR008250 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g927 Vvi18g653 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g653 K01537 - vvi:100262693 793.882