Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g654 ATGGTTACTGGAGACAACATAAACACTGCAAAGGCAATTGCTAGAGAATGTGGCATTCTGACTGATGAAGGCATAGCAATTGAAGGTCCAGTATTTCGTGAGAAGAGTGAGGAGGAATTGCAAAAACTAATTCCAAAAATTCAGGTAATGGCTCGATCTTCACCATTGGATAAGCATATCCTTGTGAAACACTTGAGAACTGCATTGGAAGAAGTTGTTGCAGTGACTGGGGATGGTACAAATGATGCTCCTGCACTTCATGAAGCAGACATTGGGCTTGCAATGGGCATTGCTGGAACAGAGGTGGCAAAAGAGAGTGCTGATGTCATAATTATGGATGATAACTTCTCCACTATTGTGACTGTGGGCAAATGGGGACGCTCAATTTATATTAACATTCAGAAATTTGTTCAATTTCAGTTGACAGTCAATATCGTTGCCCTAATTGTAAACTTTTCTTCAGCATGTTTGACAGGAAATGCTCCCCTGACCGCGGTTCAGCTTCTGTGGGTCAACATGATTATGGATACACTGGGAGCACTTGCACTGGCTACTGAACCTCCTAATGATGAGTTAATGAAAAGATCTCCAGTGGGAAGGAAAGAAAATTTCATCAGTAATGTGATGTGGAGAAATATCATTGGGCAGTCTCTCTATCAATTTGTCATAATATGGTTTCTTCAAACAAGAGGGAAAGCATTTTTCCATCTTGATGGCCCGGATTCTGATTTGATTCTAAACACAATTATTTTCAACTCCTTCGTCTTTTGTCAGGTTTTCAATGAGATCAACTCCAGGGAGTTGGAGAAGATAAATGTCTTCAAGGGCATGCTAAGGAACCATGTGTTTGTAGCTGTAGTCACATGCACTGTCGTATTTCAAATCATAATCGTCCAGTTCCTTGGTACCTTTGCAAACACATCCCCTCTTACTATGCAGCAGTGGATTGGTAGCATTCTCCTTGGATTCCTGTGCATGCCAATTGCAGCTGCCTTAAAAATGATTCCTGTGGATGGAAAATGA 1023 41.15 MVTGDNINTAKAIARECGILTDEGIAIEGPVFREKSEEELQKLIPKIQVMARSSPLDKHILVKHLRTALEEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIMDDNFSTIVTVGKWGRSIYINIQKFVQFQLTVNIVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRKENFISNVMWRNIIGQSLYQFVIIWFLQTRGKAFFHLDGPDSDLILNTIIFNSFVFCQVFNEINSRELEKINVFKGMLRNHVFVAVVTCTVVFQIIIVQFLGTFANTSPLTMQQWIGSILLGFLCMPIAAALKMIPVDGK* 341
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7618240 7623443 + Vvi18g654 Vvi18g654 780357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g654 340 PANTHER CALCIUM-TRANSPORTING ATPASE 1 338 - -
Vvi18g654 340 Gene3D - 122 335 - -
Vvi18g654 340 PRINTS P-type cation-transporting ATPase superfamily signature 76 95 - -
Vvi18g654 340 PRINTS P-type cation-transporting ATPase superfamily signature 100 112 - -
Vvi18g654 340 PANTHER CATION TRANSPORTING ATPASE 1 338 - -
Vvi18g654 340 Pfam haloacid dehalogenase-like hydrolase 1 90 - -
Vvi18g654 340 Pfam Cation transporting ATPase, C-terminus 161 335 IPR006068 -
Vvi18g654 340 PRINTS H+-transporting ATPase (proton pump) signature 76 92 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi18g654 340 PRINTS H+-transporting ATPase (proton pump) signature 108 133 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Vvi18g654 340 Gene3D - 1 121 IPR023214 -
Vvi18g654 340 SUPERFAMILY Calcium ATPase, transmembrane domain M 59 336 IPR023298 -
Vvi18g654 340 SUPERFAMILY HAD-like 1 181 IPR036412 -
Vvi18g654 340 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 46 157 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g933 Vvi18g654 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g654 K01537 - vvi:100262693 663.685