Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g66 ATGGCTGCTCCGGCTGCCGGCGAACGCTCTCTGCAGGAAACGCCGACGTGGGCTGTGGCGCTGGTGTGCGCCGTCTTTGTGATAGTGTCTGTACTCATTGAACATGGAATCGAGTCTCTTGCAAAGTGGTTTAAGAAAAAGCAGAAGAAGGCCATGAGTGAAGCCCTGGAGAAAATAAAAGCTGAGTTGATGCTACTAGGCTTTATTTCATTGCTACTCACCATCGGTACTAGATTCATTGCCAAGATATGCATCCCTGCTGAACTGGGAAGCACCATGCTTCCGTGCAAGCAAATGATATTGCGTAGAGTTTTGGCCGCCCAGGCTGGAGGTGACTATTGCTCCAAATCTGATAAAATACCATTGATTTCGCAAACGGGAGTGCACCAACTGCATATATTTATATTTATGCTGGCAGTTTTCCATGTGCTTTACAGCGTCGTGACCATGGCTTTGGCCCAGGCCAAGATGAAGAAATGGAAGTCTTGGGAGTCGGAGACATCTTCCTTGGAATATGAATTCACAAATGATCCAGCGAGATTCAGGTTCACCCATCAGACTTCCTTCGTGAGGCGCCACGCTGGCTTCTCCAGAGCACCTGGGATTAGATGGATTGTGGCATTCTTCAGGCAATTCTTTGCCTCAGTGACGAAGGTGGACTACACAACAATGCGTCGTGGATTTATTAATGCACATCTAGCTCCAAACAGCAAATTTAACTTCCACAAATACATAAAGAGATCCATGGAAGATGATTTCAAAGTGGTTGTGGGTATTAGTATGCCATTGTGGATTTTTGCCATCATCTTCATGCTTCTAAATGTTTACAAATGGTACACCCTCTCATGGATGCAAATAGTGCCAGTCACGATACTTCTTGTAGTGGGCACCAAGCTTGAACTGATTATCATGGAGATGGCAGAAGAAATCCAAGATAGAACCACTGTTGTTAAAGGGGCCCCAATTGTGGAGCCAAACAACAAGTTTTTCTGGTTTAATCGGCCTCACTGGGTTCTCCTTTTGATTCATTTCATCCTTTTCCAGAATGCATTTCAAATGTCATTCTTCCTATGGATAACTTATGAATATGGGATCAAGTCATGCTTCCATGAAAACTTGGCTGAGATTTTGGTGAGACTTGTCTGTGGAGTTGCCCTTCAAATCCTCTGCAGCTACATCACCTTCCCTCTCTATGCCTTGGTAACACAAATGGGTTCTCACATGAAGAAATCAATCTTTGAGGAGCAAACCGCACAGGCCCTTAAGAAATGGCAGAAGGCTGCAAAGGAGAGGAAGAAGTTGAGAAAAGCAGGGGGAGATATTGCTCCTGGGAGTCTAGGTGGAGAAAACACACCATCCCATGGCGCTTCACCCTTGCATTTACTACGCAACCACAAGTACAGGTCTAGTACAAATGAAGTGGAAAGTGCTCCCACTTCCCCGAAATCATGCCAGTCTGACACTGATCTCTCTGACATGGAGGAGAAACCTATTTCCCACACGAATCATTTGCCACAAACCTCCGTACATCTACATCTCAGGCCCAAAGACAAATTTATCAATTGTTAA 1569 45.19 MAAPAAGERSLQETPTWAVALVCAVFVIVSVLIEHGIESLAKWFKKKQKKAMSEALEKIKAELMLLGFISLLLTIGTRFIAKICIPAELGSTMLPCKQMILRRVLAAQAGGDYCSKSDKIPLISQTGVHQLHIFIFMLAVFHVLYSVVTMALAQAKMKKWKSWESETSSLEYEFTNDPARFRFTHQTSFVRRHAGFSRAPGIRWIVAFFRQFFASVTKVDYTTMRRGFINAHLAPNSKFNFHKYIKRSMEDDFKVVVGISMPLWIFAIIFMLLNVYKWYTLSWMQIVPVTILLVVGTKLELIIMEMAEEIQDRTTVVKGAPIVEPNNKFFWFNRPHWVLLLIHFILFQNAFQMSFFLWITYEYGIKSCFHENLAEILVRLVCGVALQILCSYITFPLYALVTQMGSHMKKSIFEEQTAQALKKWQKAAKERKKLRKAGGDIAPGSLGGENTPSHGASPLHLLRNHKYRSSTNEVESAPTSPKSCQSDTDLSDMEEKPISHTNHLPQTSVHLHLRPKDKFINC* 523
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 659972 671731 - Vvi18g66 Vvi18g66 779769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g66 522 PANTHER MLO-LIKE PROTEIN 1 4 99 IPR004326 GO:0006952|GO:0016021
Vvi18g66 522 PANTHER MLO-LIKE PROTEIN 1 99 504 IPR004326 GO:0006952|GO:0016021
Vvi18g66 522 PANTHER MLO-LIKE PROTEIN 99 504 - -
Vvi18g66 522 PANTHER MLO-LIKE PROTEIN 4 99 - -
Vvi18g66 522 MobiDBLite consensus disorder prediction 434 509 - -
Vvi18g66 522 MobiDBLite consensus disorder prediction 471 487 - -
Vvi18g66 522 Pfam Mlo family 8 98 IPR004326 GO:0006952|GO:0016021
Vvi18g66 522 Pfam Mlo family 100 465 IPR004326 GO:0006952|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g1218 Vvi18g66 ECH
Vvi7g1219 Vvi18g66 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g66 K08472 - vvi:100264998 937.947