Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g675 ATGTTGAGGAAGTGTTGGAGGCAAGTGGAGAGAGTGTTGGGAAGGGGAGGCGGAGATGAGCTGCTGTGGCACATGGACTTGAAGCCTCATCCGTGTGGGGACTTGTCCATAGCCGTTGTTCAAGCCAATTCTTCTCTAGAAGACCAAAGTCAAGTCTTCACTTGTCCCTCCGCTACCTTCGTCGGCGTCTTCGACGGCCACGGCGGCCCTGAGGCCTCTCGCTTCCTCAACAGTCACCTCTTCCCCCGTCTACATAGACTCGCTTCGGAGCAAGGCGGATTGTCTACGGATATAATTAAGAAGGCATTCGATGACACTGAAGAGCAATTCTTGCATTTGGTGAAGCGATCTTGGCCTGCTCGACCGCAGATTGCTTTGGTCGGATCGTGTTGTCTTGTTGGAGTAATTTCTAATGATGTGTTGTATGTGGCCAATCTTGGGGACTCGAGGGCGGTTCTTGGCCGGAGAGTCTCCAGGGGGGGGAAGAACATGATAGTGGCAGAACGATTATCCACTGATCATAATGTTGGAGATGAAGAGGTGAGGAAGGAGGTTGAAGCACTCCATCCAGATGATGCGCATATAGTTGTAAATAATCGTGGAGTTTGGCGGATTAAGGGTATAATTCAGGTGTCCAGATCTATTGGAGACATATATTTGAAGAAACCTGAGTTTAACAGAGATCCCCTCTTCCAGCAGTTTGGATATCCCATTCCACTGAAACGACCTGTAATGACTGCAGAACCCTCAATTCAAGTGAGGAAGTTGATATCAGAGGACTTATTTTTGATATTTGCATCAGATGGCCTTTGGGAGCAATTGAGCGATGAAGCAGTTGTGGATATCGTCCACAAAAACCCAAGAGCTGGAATAGCCAAGCGATTGGTCACAGCTGCTCTTCAGGAGGCAGCAAAGAAAAACGAAATTAAATACGATGAACTGAAAAAGACAAGTAAAGGGTTGAGGCGTCACTTCCATGATGACATCACTGTTGTTGTGATGTATCTAGATCACCTCCACGGATCAGCTGGTGGTAGCAGATTCAAGGAAGGCTCTGTTGACTGCATCAGTGCTCCGGTTGATATCTACTCTCTCAATGTGGATGAAGCAGAAGACCCACTTTATATGGATTCCTGA 1137 47.58 MLRKCWRQVERVLGRGGGDELLWHMDLKPHPCGDLSIAVVQANSSLEDQSQVFTCPSATFVGVFDGHGGPEASRFLNSHLFPRLHRLASEQGGLSTDIIKKAFDDTEEQFLHLVKRSWPARPQIALVGSCCLVGVISNDVLYVANLGDSRAVLGRRVSRGGKNMIVAERLSTDHNVGDEEVRKEVEALHPDDAHIVVNNRGVWRIKGIIQVSRSIGDIYLKKPEFNRDPLFQQFGYPIPLKRPVMTAEPSIQVRKLISEDLFLIFASDGLWEQLSDEAVVDIVHKNPRAGIAKRLVTAALQEAAKKNEIKYDELKKTSKGLRRHFHDDITVVVMYLDHLHGSAGGSRFKEGSVDCISAPVDIYSLNVDEAEDPLYMDS* 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7874252 7878811 + Vvi18g675 Vvi18g675 780378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g675 378 Gene3D - 25 340 IPR036457 -
Vvi18g675 378 SMART PP2C_4 28 334 IPR001932 -
Vvi18g675 378 Coils Coil 297 317 - -
Vvi18g675 378 CDD PP2Cc 41 336 IPR001932 -
Vvi18g675 378 ProSiteProfiles PPM-type phosphatase domain profile. 34 336 IPR001932 -
Vvi18g675 378 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 3 374 - -
Vvi18g675 378 Pfam Protein phosphatase 2C 57 307 IPR001932 -
Vvi18g675 378 PANTHER ALPHABET, ISOFORM E-RELATED 3 374 - -
Vvi18g675 378 SUPERFAMILY PP2C-like 41 338 IPR036457 -
Vvi18g675 378 ProSitePatterns PPM-type phosphatase domain signature. 60 68 IPR000222 GO:0043169
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g672 Vvi18g675 ECH
Vvi7g966 Vvi18g675 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g675 - K01102 vvi:100854185 763.837