Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g685 ATGAGAAAGAGAAACCACTTAGCATCCATGGAGATGCTGTACCTCTGTATCCCAATTTTCTTAGCCTTGTATGTCTTCACATGGCACTTCCTTCACAAGCTCCACAATCTCCCACCAAGCCCATTTCCCATTTTGCCCTTGATCGGCCATCTCTATCTCCTTAAGAAACCGCTGCACCGAAACTTATCCAAAATTTCGGACCGCCATGGCCCCATACTCTTCTTGCGATTCGGTTACCGGCCTGTGCTCATTGTTTCCTCACATTCAGCTGCTGAGGAATGTTTCACCAAGAACGACATCATTTTTGCCAACCGCCCCCGCCTGATCGCCGGCAAACACCTAGGTTACAACTATACGGCCATCGGCACAGCTCCCTACGGCGACCATTGGCGAAATCTCCGGCGAATCTCCTCTTTCGAGATTCTATCATCCAATCGTCTTCAGATGCTTTCCGGCATTCGCTCCGATGAGGTCCGAACGCTGATTTGCCGGCTTGTTAAGAATCAAAATCAGGTGGTGGAGGAGGCTAGGAAATTTCGAGAGATGGTGTCGAAGGCGTTCCGGTTGGCAGGTACGAATATGGTAGATTTCTTGCCAATTTTGGGGTGGTTAGGGTTGAAAGGGACAGAGAAGAGGTTGATGGAGCTGCAAAAAATGAGAGACAGCTTCATACAGAATTTGATAGAAGAGCACAGAATCAAGGGGAGTAAGTGTGAAAGAAGGCCGAAGACGATGATTGAAGTTCTGTTATCACTGCAAGAGACAGAGCCTGAGAACTATACAGACGAGATCATCGGAGGCCTCATGCTATCTATGTTAACCGCAGGAACAGATACTTCAGCCGGGACCATGGAATGGGCACTGTCGCTTTTGCTGAACAGTCCAGAAGTGCTTAAGAAGGCGCAGCAAGAGATTGACGTCCATTTGGGACATGATCGTCTGATTGAGGAAGTGGATCTAGCCCAGCTTCCTTATCTTCGGAGCATTATTAAGGAGACGCTGCGTATGTACCCAGCAGGTCCATTGCTAATCCCTCACGAGTCCTCAAAGGAGTGCTTTGTAGGAGGGTTTCGCATCCCACCAGGCACCATGCTGCTTGTTAATGTGTGGGCTATACATAATGACCCCAAAATTTGGGCTGAGCCCACAAAATTCAAACCAGAGAGATTTGAGGGTGAAGAAGGGGAGCGAGATGGGCTCAGGTTTTTGCCCTTTGGATCAGGGAGAAGAGGTTGTCCTGGGGAGGGCCTAGCCATCCGCATGGTGGGCTTGGCCATGGGTTCACTTATTCAGTGCTTTGATTGGGAGAGGGTTGATCAACAGATGGTGGACATGACAGAAGGGCACGGTCTCAGTATTCCTAAGGCTCAGCCTTTACTGGCCAAGTGTCGGCCTCGCCCAACCATGGTCAACCTCCTTTCCCAACTCTGA 1431 49.69 MRKRNHLASMEMLYLCIPIFLALYVFTWHFLHKLHNLPPSPFPILPLIGHLYLLKKPLHRNLSKISDRHGPILFLRFGYRPVLIVSSHSAAEECFTKNDIIFANRPRLIAGKHLGYNYTAIGTAPYGDHWRNLRRISSFEILSSNRLQMLSGIRSDEVRTLICRLVKNQNQVVEEARKFREMVSKAFRLAGTNMVDFLPILGWLGLKGTEKRLMELQKMRDSFIQNLIEEHRIKGSKCERRPKTMIEVLLSLQETEPENYTDEIIGGLMLSMLTAGTDTSAGTMEWALSLLLNSPEVLKKAQQEIDVHLGHDRLIEEVDLAQLPYLRSIIKETLRMYPAGPLLIPHESSKECFVGGFRIPPGTMLLVNVWAIHNDPKIWAEPTKFKPERFEGEEGERDGLRFLPFGSGRRGCPGEGLAIRMVGLAMGSLIQCFDWERVDQQMVDMTEGHGLSIPKAQPLLAKCRPRPTMVNLLSQL* 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7942169 7953201 - Vvi18g685 Vvi18g685 780388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g685 476 Pfam Cytochrome P450 174 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 Pfam Cytochrome P450 39 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PANTHER CYTOCHROME P450 82C3-RELATED 20 475 - -
Vvi18g685 476 Coils Coil 206 226 - -
Vvi18g685 476 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PRINTS E-class P450 group I signature 327 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PRINTS E-class P450 group I signature 368 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PRINTS P450 superfamily signature 328 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 SUPERFAMILY Cytochrome P450 38 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 Gene3D Cytochrome P450 32 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g685 476 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Vvi18g685 476 PANTHER CYTOCHROME P450 81E8 20 475 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g983 Vvi18g685 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g685 - - vvi:100260792 901.353