Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g686 ATGCTGTACTTCTATATCCCACTTTTCTTTGTCTTGTATGTCTTCACATCGCACTTCCTTCACAAGTTCCGCAATCTCCCACCAAGTCCCTTCCCCACTTTGCCCTTGATCGGCCATCTCTATCTCCTTAAGAAACCGCTGCACCGAACCTTATCCAAAATTTCGGACCGCCACGGCCCCATACTCTTCCTTCGATTCGGTTCCCGGCCTGTACTCCTTGTTTCCTCACCTTCAGCCTCTGAGGAATGTTTCACCAAGAACGACGTCGTTTTTGCCAACCGCCCTCGCCTGATCGCCGGCAAACACCTAGGTTACAACTATACATCCATGAGCTGGGCCCCCCACGGCGACCATTGGCGAAATCTCCGGCGAATTTCCTCTTTCGAGATTCTATCATCCAATCGTCTTCAGACGCTTTCCGGCATTCGCTCCGATGAAGTCCGATCTCTGGTTCGCTGGCTTTTTAAGAATCAAAGTCAGATGGTGGAGGAGGCTAGGATGTTTCGAGAGATGGTGTCGGAGACGTTCCAGTTAGCAGGTGCGACGAATATGGTAGATTTCTTACCAATTTTGGGCTGGCTAGGGTTGAAAGGGACAGAGAGGAGGTTGATTAAGTTGCAAAAAAGGCGAGAGAGCTTCATACAGAATTTGATAGAAGAGCACAGAAGGAAGGGAAGTAACTGCGAAGGGAGGCAGAAGACGATGATTGAAGTTCTGTTATCGCTGCAAGAGACAGAGCCTGAGTACTATACAGACGAGATCATCAGAGGCCTCATGCTATCTATGTTGACCGGAGGAACAGATACCTCGGCTGGGACCATGGAATGGGCATTGTCGCTTTTGCTGAACAATCCAAAAGTCCTTAAGAAGGCACATCAAGAGATTGACGACCGCTTGGGACATGATCGTCTGATTGAGGAACTGGACCTAGCCCAGCTTCCTTATCTCCGAAGCATCATTAAGGAGACACTGCGTATGTATCCGGCAGGCCCATTGCTAGTCCCTCATGAGTCGTCAAAGGAGTGCTCTGTAGGAGGGTTTCGCATCCCACAAGGCACCATGCTGCTTGTTAATCTGTGGGCTATACAAAGGGATCGAGATGGGTTCAAGTTTGTTCCTTTTGGGTCAGGGAGACGAGGTTGTCCAGGGGAGGCCCTAGCCATCCGCATAGTTGGGCTGGCCTTGGGTTCTCTCATTCAGTGCTTTGATTGGGAGAGGGTTGATGAGCAGATGGTGGACATGACTGAGGGGGGTGGTCTCACTCTGCCTAAGGCTCAGCCTTTACTGGCGAAGTGTCGGCCTCGTCCAACCATGGTCAACCTCTTTTCCCAACTCTGA 1338 50.6 MLYFYIPLFFVLYVFTSHFLHKFRNLPPSPFPTLPLIGHLYLLKKPLHRTLSKISDRHGPILFLRFGSRPVLLVSSPSASEECFTKNDVVFANRPRLIAGKHLGYNYTSMSWAPHGDHWRNLRRISSFEILSSNRLQTLSGIRSDEVRSLVRWLFKNQSQMVEEARMFREMVSETFQLAGATNMVDFLPILGWLGLKGTERRLIKLQKRRESFIQNLIEEHRRKGSNCEGRQKTMIEVLLSLQETEPEYYTDEIIRGLMLSMLTGGTDTSAGTMEWALSLLLNNPKVLKKAHQEIDDRLGHDRLIEELDLAQLPYLRSIIKETLRMYPAGPLLVPHESSKECSVGGFRIPQGTMLLVNLWAIQRDRDGFKFVPFGSGRRGCPGEALAIRIVGLALGSLIQCFDWERVDEQMVDMTEGGGLTLPKAQPLLAKCRPRPTMVNLFSQL* 446
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7956026 7958282 - Vvi18g686 Vvi18g686 780389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g686 445 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 PRINTS E-class P450 group I signature 254 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 PRINTS E-class P450 group I signature 274 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 PRINTS E-class P450 group I signature 317 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 PRINTS E-class P450 group I signature 371 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 PRINTS E-class P450 group I signature 381 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 Coils Coil 196 216 - -
Vvi18g686 445 Gene3D Cytochrome P450 18 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 374 383 IPR017972 GO:0005506|GO:0016705
Vvi18g686 445 PRINTS P450 superfamily signature 265 282 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 PRINTS P450 superfamily signature 318 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 PRINTS P450 superfamily signature 372 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 Pfam Cytochrome P450 28 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 Pfam Cytochrome P450 366 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 Pfam Cytochrome P450 155 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g686 445 PANTHER CYTOCHROME P450 82C3-RELATED 9 444 - -
Vvi18g686 445 PANTHER CYTOCHROME P450 81E8 9 444 - -
Vvi18g686 445 SUPERFAMILY Cytochrome P450 27 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g986 Vvi18g686 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g686 - - vvi:100267741 868.611