Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g693 ATGGCGGATCAGGAGAACTCCGTGCGGATCACAAGGGCAGCCAAGAAGAGGGCCGCTGCTGCCATGGCCGCGTCAGATTCACTGCAGCTTCCGCCCAACAAGAAGCGTGTGGTCTTGGGGGAGCTTCCCAATTTATCCAACGTCGCTGCCACTCCGGCTGCTGTGCCCGCTTCTGGAGCCCAGAAGCAGAAGTTTAGGCCCAAGAAGAAGGAGAAGGTGAAGGCGGCGGTGGTGGCGCCTGATGTTGGTGCCAAGTCGGATGATCCGCAGATGTGTGGGCCTTACGCTACTGACATTTACGAGTATCTTCACAGCATGGAGATGGAGCCAAAGAGAAGACCATTGCATGATTACATTGAGAAGGTTCAGAAGGATGTGAGTCACAATATGAGGGGGATTTTGGTGGATTGGTTGGTGGAGGTTGCAGAGGAATACAAGCTTGCGTCTGACACTTTGTATCTGACCATTTCTTACATTGATAGATTCTTATCTTCAAAAGCTCTCAACAGGCAGAGGCTCCAGCTATTGGGTGTTTCTTCAATGCTCATTGCTGCAAAGTATGAAGAGATCAGCCCTCCACACGTGGAAGATTTTTGTTACATAACAGACAATACATACACCAAAGAGGAGGTGGTGAAGATGGAGGCTGATATTCTAAAATCTCTTAATTTTGAAATGGGCAATCCCACAATAAAGACATTTCTCAGACGGTTCACCAGGATTGCTCAAGAAAATTACAAAACTCCCAATTTGCAGTTGGAGTTTCTGGTTTATTACCTTGCAGAGCTAAGTTTGTTGGATTATGGATGTGTGAAATTCTTACCTTCCATGGTAGCTGCATCAGTTATATTTCTTTCAAGATTCACACTCCGTCCAAAGACACATCCTTGGTGTTCAAGTCTGCAACATCATTCTGGATATAAACCATCAGAGCTGAAGGAATGTGTTCTAATTATACATGATTTACAACTGAGTAGAAGAGGAGGTTCTTTGGTGGCAGTAAGAGAGAAATACAAGCAGCATAAGTTCAAATGCGTGGCAACATTGTCTTCCCCCTCAGTGATACCGGTTTCTTATTTTGAAGATATTAAAGAATGA 1098 45.26 MADQENSVRITRAAKKRAAAAMAASDSLQLPPNKKRVVLGELPNLSNVAATPAAVPASGAQKQKFRPKKKEKVKAAVVAPDVGAKSDDPQMCGPYATDIYEYLHSMEMEPKRRPLHDYIEKVQKDVSHNMRGILVDWLVEVAEEYKLASDTLYLTISYIDRFLSSKALNRQRLQLLGVSSMLIAAKYEEISPPHVEDFCYITDNTYTKEEVVKMEADILKSLNFEMGNPTIKTFLRRFTRIAQENYKTPNLQLEFLVYYLAELSLLDYGCVKFLPSMVAASVIFLSRFTLRPKTHPWCSSLQHHSGYKPSELKECVLIIHDLQLSRRGGSLVAVREKYKQHKFKCVATLSSPSVIPVSYFEDIKE* 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 7996241 7998773 + Vvi18g693 Vvi18g693 780396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g693 365 PANTHER CYCLINS 26 363 IPR039361 -
Vvi18g693 365 SUPERFAMILY Cyclin-like 87 226 IPR036915 -
Vvi18g693 365 Pfam Cyclin, C-terminal domain 229 351 IPR004367 -
Vvi18g693 365 PANTHER CYCLIN-A3-1-RELATED 26 363 - -
Vvi18g693 365 ProSitePatterns Cyclins signature. 131 162 IPR006671 -
Vvi18g693 365 CDD CYCLIN 130 219 IPR013763 -
Vvi18g693 365 PIRSF Cyclin_A_B_D_E 1 359 IPR039361 -
Vvi18g693 365 Gene3D - 98 348 - -
Vvi18g693 365 Gene3D - 112 227 - -
Vvi18g693 365 SMART Cyclin_C_2 229 352 IPR004367 -
Vvi18g693 365 SMART cyclin_7 233 321 IPR013763 -
Vvi18g693 365 SMART cyclin_7 136 220 IPR013763 -
Vvi18g693 365 CDD CYCLIN 229 320 IPR013763 -
Vvi18g693 365 Pfam Cyclin, N-terminal domain 98 226 IPR006671 -
Vvi18g693 365 SUPERFAMILY Cyclin-like 229 354 IPR036915 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g655 Vvi18g693 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g693 K06627 - vvi:100250548 675.241