Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g719 ATGGCTCAGCCTCAAGAACAGAAAACACACCAACAGCCGCACAACCTCCCATTCCTTTTGGACACTCTTTACTGCGAAGAGAACCACTGGGAGGAAGAAGTGAGAGAGGAGGGTTTCTTAGAAGAGGAAGAAGAAGAGAGCTATTACAGTGATGGCAGTAAACCAAACGCTCCACCGTTATTGGAGCCGGACCTCCTATGCGAAGACGAAGAGCTCGTCTCTTTGTTCTCAAAAGAAGAGAAAAATGACCTCCATAGTAACCCCGAAAGCAACCCATTAGCGGCTGGAGCTAGAAGCGAGGCCGTGGAGTGGATGCTGAGGGTCAATGCCCACTACTCTTTCTCTGCTCTCACTGCAGTCCTGGCTGTTAATTATTTTGATAGGTTTCTCTTCAGCTGCGATGTTCAGGGAGAAAAGCCATGGATGACCCAACTCGCCGCTGTGGCTTGTCTCTCCCTTGCTGCTAAGGTGGAAGAGACCCAAGTGCCCCTTTTACTAGACTTGCAAGTGGAGGAGACGATGTATGTGTTCGAGGCAAAGACCATTCAGAGGATGGAGATTATGGTGCTCTCCACGCTTCGATGGAAGATGAACCCTGTGACCCCGCTTTCATTTCTTGATTATATTACGAGGAGGCTTGGATTGAAAAATCATCTCTGTTGGGAATTTCTCAAGAGGTGTGAGCGCCTCCTTCTCTCTGTTCTTTCTGATTGTAGGTTCGGGTGTTATCTTCCTTCTGTAATCGCCACCGCCATAATGCTGCATGTCATCGATAGCGTAGAACCCTGCATTCGTGTCCAATACCAGAGCCAGCTACTGGGTATTCTCGGAATTGATAAGGACAAAGTAGAGGATTGCAGTCAGCTCATCCTGGATATAGCATCGAGTGCCCGTTGTCACCATCACAATAAACGCAAGTTTGCCTCCACACCGGGCAGTCCAAATGGCGTTATGGATGGATGGTTCAGCTGCGACAGCTCAAATGATTCATGGGCTGTAGCGGTTTCTTCCTCGCCTTCCTCATCGGAGCATTTGTCCAAGAAGAGTAGAGGTCAGGAGCAGCATCTGCAGACTCTCAACCAAGCTACTGCTGATGCCCCGACGGTCATTCCTCGCTAG 1119 49.42 MAQPQEQKTHQQPHNLPFLLDTLYCEENHWEEEVREEGFLEEEEEESYYSDGSKPNAPPLLEPDLLCEDEELVSLFSKEEKNDLHSNPESNPLAAGARSEAVEWMLRVNAHYSFSALTAVLAVNYFDRFLFSCDVQGEKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEETMYVFEAKTIQRMEIMVLSTLRWKMNPVTPLSFLDYITRRLGLKNHLCWEFLKRCERLLLSVLSDCRFGCYLPSVIATAIMLHVIDSVEPCIRVQYQSQLLGILGIDKDKVEDCSQLILDIASSARCHHHNKRKFASTPGSPNGVMDGWFSCDSSNDSWAVAVSSSPSSSEHLSKKSRGQEQHLQTLNQATADAPTVIPR* 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8294895 8296810 - Vvi18g719 Vvi18g719 780422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g719 372 SUPERFAMILY Cyclin-like 182 310 IPR036915 -
Vvi18g719 372 PANTHER CYCLIN D3.1 PROTEIN 49 350 - -
Vvi18g719 372 MobiDBLite consensus disorder prediction 33 62 - -
Vvi18g719 372 Pfam Cyclin, N-terminal domain 79 198 IPR006671 -
Vvi18g719 372 ProSitePatterns Cyclins signature. 98 129 IPR006671 -
Vvi18g719 372 SUPERFAMILY Cyclin-like 68 198 IPR036915 -
Vvi18g719 372 MobiDBLite consensus disorder prediction 336 372 - -
Vvi18g719 372 CDD CYCLIN 98 190 IPR013763 -
Vvi18g719 372 Gene3D - 92 198 - -
Vvi18g719 372 PANTHER CYCLINS 49 350 IPR039361 -
Vvi18g719 372 Pfam Cyclin, C-terminal domain 200 309 IPR004367 -
Vvi18g719 372 SMART cyclin_7 103 191 IPR013763 -
Vvi18g719 372 SMART Cyclin_C_2 200 316 IPR004367 -
Vvi18g719 372 Gene3D - 199 288 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi7g1011 Vvi18g719 ECH
Vvi3g609 Vvi18g719 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g719 K14505 - vvi:100253927 690.263