Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g748 ATGCAGATTTTACAACCATGTAATAAACACAAACTACTTGACGACACTAGTGATCATTATATAATGAGGTATCAGCGCCCATATGGACTCCATTCAAGTGAAAGAACCATGGGGTTTGATAATGTGGTTCATCGTCTCTACTTGATATTCCTTGCATGGATTTTGTTTACTCTCCATTTCAGATCAGCGTCAGGAGAGAGGTCCACGTATATCATCCACATGGACAAGTCTCTCATGCCTAAGGCTTTTGCTACCCATCACCACTGGTACGCCTCCACCGTCGATTCCCTCATGACGGCTGCTTCCACAACATCCATCGCCGTTCAATCCACGCCTAAGCTTATCTACATTTATGATCATGTACTTCATGGTTTTAGCGCAGTTCTATCCAAAGTGCCATTGTATAAGGATCCTATAGCTATAGCTTCATTTGCTGCCATGGAGAAGGGTGTGCTAGTTTCATCTTCAGCTGGGAATGCAGGCCCATCTCTGGGGACGTTACACAATGGAATCCCATGGGTGTTGACCGTCGCAGCGGGTACCATTGATCGTTCATTCGCAGGCACTTTGACTCTTGGTAATGGGTTAACCATCAGAGGATGGACCATGTTTCCTGCAAGTGCTTTGGTCCAAGATCTACCTCTTGTTTATAACAAGACTTTGTCTGCCTGCAATTCATCAGCACTGTTGTCTGGAGCACCTTATGGCGTCGTTATATGCGACAAGGTAGGATTTATTTATGAACAATTAGATCAGATTGCTGCGTCAAAGGTTGGAGCGGCTATAATTATTTCCGACGACCCCGAATTATTCGAGTTAGGTGGTGTACCTTGGCCTGTTGTGGTGATCAGCCCCACGTATGCAAAAGCTGTGATTGATTATGCCAAAACTGCTCATAAACCTACAGCCACCATGAAGTTCCAACAGACCCTTCTGGATACAAAGCCTGCGCCAGCTGTTGCTTCTTACACATCGAGAGGTCCTTCCCGCAGCTATCCTGGTATCTTGAAGCCGGACGTGATGGCACCAGGGTCATTGGTTTTGGCTGCTTGGATTCCAAATTCTGAGGCTGCAATAATTGGAAGTTTGTCGTTGTCCAGTGATTACAATATGATTTCCGGGACATCCATGGCCTGTCCACATGCTTCTGGCGTGGCTGCACTGCTGAGAGGAGCACACCCGGAATGGAGCGTGGCTGCTATTCGGTCCGCCATGGTGACCACAGCAAACCCATACGATAATACTTTTAATAACATACGGGATAACGGATTAAGTTTCGAAATTGCTTCTCCTCTCGCCATGGGAGCCGGCCAAATTGATCCGAACAGAGCACTTGACCCAGGTCTAATATACGATGCAACTCCACAAGACTACGTCAATCTCCTCTGCTCCATGAATTTCACCACCAAGCAAATCTTAACCATCACCAGATCAAACACTTACACTTGCTCCAACCCATCTCCAGACCTGAATTACCCATCCTTTATCGCTCTATACAACAACAAATCAACGGCATTCGTCCAGAAATTCCAGAGAACTGTGACGAATGTGGGAGATGGAGCATCAAGTTATAAGGCTATTGTGACAGCACCGAAGGGCTCCAAAGTCATGGTCTCACCCGCGACATTGGCCTTCGAGAACAAGTATGAAAAGCTGAGCTACACTCTGACTATAGAGTATAAGAGTGAGAAGGATGGCAAGGTGTCGTTTGGCTCGCTTACATGGATTGAAGATGATGGAAAACATACGGTGAGGAGCCCCATAGTGGTATCGCAAGTGGGAGCTGGACCATATCCTCGACAAAGCGGAAGAAGACTCATTCAGCCTTCGCAATCCAAAGGACCACTAGCTCCGCTGCCAAGCTCAATTATTCAATCAGCTGGGACAGGCCCTGGCGGTAGAATTTTCTTATTTCTTTTGATATTTGTCTCGTCAGGAGAGAGGTCCACGTATATCATCCACATGGACAAGTCTCTCATGCCTAGGGCTTTTGCTACCCATCACCACTGGTACGCCTCCACCGTCGATTCCCTCACGACGGCTGCTTCCACAAGATCCAACGCCGTTCAATCCACGCCCAAGCTTATCTACACTTATGATCATGTACTTCATGTGCCATTGTATAAGGATCCTATAGCTATAGCTTCATTTGCTGCCATGGAGAAGGGTGTGTTAGTTTCATCTTCAGCTGGGAATGAAGGCCCATCTCTTGGGACGTTACACAATGGAATCCCATGGGTGTTGACCGTCGCAGCGGGTACCATTGATCGTTCATTCGCCGGCACTTTGACTCTTGGTAATGGGTTAACCATCACAGGATGGACCATGTTTCCTGCAAGTGCTTTGGTCCAAGATCTACCTCTTGTTTATAACAAGACTTTGTCTGCCTGCAATTCATCAGCACTGTTGTCTGGAGCACCTTATGCCGTCGTTATATGCGACAAGGTAGGACTTATTTATGAACAATTATATCAGATTGCTGCGTCAAAGGTTGGAGCGGCTATAATTATTTCCGACGACCCCGAATTATTCGAGTTAGGTGGTGTACCTTGGCCTGTTGTGATGATCAGCCCCAAGTATGCAAAGGCTGTGGTTGATTATGCCAAAACTGCTCATAAACCTACAGCCACCATGAGGTTCCAACAGACCCTCCTGGATACAAAGCCTGCGCCAGCCGTTGCTTCTTACACATCGAGAGGTCCTTCCCGCAGCTATCCTGGTATCTTGAAGCCGGACGTGATGGCACCAGGGTCATTGGTTTTGGCTGCTTGGATTCCAAATTCTGAGGCTGCAATAATTGGAAGTTTGTCGTTGTCCAGTGATTACAATATGATTTCCGGGACATCCATGGCCTGTCCACATGCTTCTGGCGTGGCTGCACTGCTGAGAGGAGCACACCCGGAATGGAGCGTGGCTGCTATTCGGTCCGCCATGGTGACCACAGCAAACCCATACGATAATACTTTTAATTACATACGGGATAACGGATTAAGTTTCGAAATTGCTTCTCCTCTCGCCATGGGAGCCGGCCAAATTGATCCGAACAGAGCACTTGACCCAGGTCTAATATACGATGCAACTCCACAAGACTACGTCAATCTCCTCTGCTCCATGAATTTCACCACCAAGCAAATCTTAACCATCACCAGATCAAACACTTACACTTGCTCCAACTCATCTCCAGACCTGAATTACCCATCCTTTATCGCTCTATACAACAACAAATCAACGACATTCGTCCAGAAATTCCAGAGAACTGTGACGAATGTGGGAGATAAAGCAGCAAGTTATAAGGCTATGGTGACAGCACCGAAGGGCTCAAAAGTCATGATCTCACCGGCAACGCTGGCCTTCGAGAACAAGTATGAAAAGCTGGACTACACTCTGACTATAAAGTATAAGAGTCACAAGGATGGCAAGGTCTCGTTTGGCTCGCTTACATGGGTTGAAGATGATGGAAAACATACTGTGAGGAGTCCTATAGTGGTATCGCAAGTGGTGACACCATGTTTTAAAGAAAAGATGAGGTGTGAATCGTTTGATAAGGTGGTTCATCGTCTCCACTTGATCCTCCTGACATGGATTTTGTTGACTATTCAAGCTAGATCAATGTCAGGAGAGAGGTCTACGTATATCATCCACATGGACAAGTCTGTGATGCCCAAGGTTTTCGCAACCCATCACCACTGGTACTCCTCCATCCTTCATGCTATAAAGACTGACACTCCCACAACATCCGCCGGCCTTCAGTCCACTGCCCGGCTTATCTATACTTATGATCACGCTCTCCATGGCTTCAGCGCTCTTCTATCTTCACAAGAGTTGGAGAATCCAATAGCTATAGCTTCATTTGCTGCTATGGAGAAGGGCGTATTAGTTTCATGTTCTGCAGGGAATGCTGGCCCACTTCCTCTTGGGACATTACATAATGGAATACCATGGATCTTGACAGTCGCAGCCGGTACTATAGACCGTTCATTCACTGGAACTTTGACTCTTGGAAATGGGTTAACCATTACTGGATGGACCATGTTTCCTGCAAGTGCTGTTGTTCAAAACCTTCCTCTTATTTACGACAAGACTTTATCTGCGTGCAATTCATCAGAGTTGTTATCTGGCGCACCTTATGGCATCATCATATGCCACAACACCGGATATATCTATGGTCAATTGGGTGCGATCTCTGAGTCAGAAGTTGAAGCTGCTATATTTATTTCCGATGATCCCAAATTATTCGAGTTGGGCGGTCTAGACTGGCCTGGCGTGGTGATTAGCCCGAAAGATGCGCCGGCTCTGATTGATTATGCAAAAACTGGTAATAAACCAAGAGCCACCATGACATTCCAACAGACCATTGTGAATACAAAACCTGCACCTGCAGTTGCTTTTTACACGTCAAGAGGTCCTTCACCCAGCTGTCCTACCATCTTGAAGCCGGACGTAATGGCACCTGGGTCACTGGTTTTGGCTGCTTGGGTTCCAAATCGTGAGACAGCAAGAATTGGGACAGGTTTGTCCTTGTCCAGTGACTACACCATGGTCTCCGGCACATCCATGGCTTGTCCGCATGCGTCTGGTGTGGCTGCGCTCCTCAGAGGTCTAGTATACGATGCAACCCCACAAGACTACGTCAACCTCCTCTGCTCCATGAACTTCACCAAAAAGCAAATCTTAACCATTACTAGATCAAACACTTACACTTGCCCCAAAACATCTCCAGACTTGAATTACCCATCATTCATTGCTCTGTACAGCCAAAATGACAACAAATCAACAACAGTGGTTCAGAAATTTCAAAGAACTGTAACGAATGTAGGAGATGGCACAGCAACTTATCACGCTACAGTGATAGCTCCTAGAGGCTCCAAGGTCACAGTCTCACCGACGACTCTAGTCTTTGAGAAGAAGTATGAGAAGCAGAGTTACACTATGAGTATAAAGTATAAGAGCGACAAGGACGGGAAGATTTCCTTTGGTTGGTTGACATGGATCGAAGACGATGGAGAACACACAGTGAGGAGCCCGATAGTGGTTTCACCGCTGGTGGTGAACCACCGGTAA 5061 46.73 MQILQPCNKHKLLDDTSDHYIMRYQRPYGLHSSERTMGFDNVVHRLYLIFLAWILFTLHFRSASGERSTYIIHMDKSLMPKAFATHHHWYASTVDSLMTAASTTSIAVQSTPKLIYIYDHVLHGFSAVLSKVPLYKDPIAIASFAAMEKGVLVSSSAGNAGPSLGTLHNGIPWVLTVAAGTIDRSFAGTLTLGNGLTIRGWTMFPASALVQDLPLVYNKTLSACNSSALLSGAPYGVVICDKVGFIYEQLDQIAASKVGAAIIISDDPELFELGGVPWPVVVISPTYAKAVIDYAKTAHKPTATMKFQQTLLDTKPAPAVASYTSRGPSRSYPGILKPDVMAPGSLVLAAWIPNSEAAIIGSLSLSSDYNMISGTSMACPHASGVAALLRGAHPEWSVAAIRSAMVTTANPYDNTFNNIRDNGLSFEIASPLAMGAGQIDPNRALDPGLIYDATPQDYVNLLCSMNFTTKQILTITRSNTYTCSNPSPDLNYPSFIALYNNKSTAFVQKFQRTVTNVGDGASSYKAIVTAPKGSKVMVSPATLAFENKYEKLSYTLTIEYKSEKDGKVSFGSLTWIEDDGKHTVRSPIVVSQVGAGPYPRQSGRRLIQPSQSKGPLAPLPSSIIQSAGTGPGGRIFLFLLIFVSSGERSTYIIHMDKSLMPRAFATHHHWYASTVDSLTTAASTRSNAVQSTPKLIYTYDHVLHVPLYKDPIAIASFAAMEKGVLVSSSAGNEGPSLGTLHNGIPWVLTVAAGTIDRSFAGTLTLGNGLTITGWTMFPASALVQDLPLVYNKTLSACNSSALLSGAPYAVVICDKVGLIYEQLYQIAASKVGAAIIISDDPELFELGGVPWPVVMISPKYAKAVVDYAKTAHKPTATMRFQQTLLDTKPAPAVASYTSRGPSRSYPGILKPDVMAPGSLVLAAWIPNSEAAIIGSLSLSSDYNMISGTSMACPHASGVAALLRGAHPEWSVAAIRSAMVTTANPYDNTFNYIRDNGLSFEIASPLAMGAGQIDPNRALDPGLIYDATPQDYVNLLCSMNFTTKQILTITRSNTYTCSNSSPDLNYPSFIALYNNKSTTFVQKFQRTVTNVGDKAASYKAMVTAPKGSKVMISPATLAFENKYEKLDYTLTIKYKSHKDGKVSFGSLTWVEDDGKHTVRSPIVVSQVVTPCFKEKMRCESFDKVVHRLHLILLTWILLTIQARSMSGERSTYIIHMDKSVMPKVFATHHHWYSSILHAIKTDTPTTSAGLQSTARLIYTYDHALHGFSALLSSQELENPIAIASFAAMEKGVLVSCSAGNAGPLPLGTLHNGIPWILTVAAGTIDRSFTGTLTLGNGLTITGWTMFPASAVVQNLPLIYDKTLSACNSSELLSGAPYGIIICHNTGYIYGQLGAISESEVEAAIFISDDPKLFELGGLDWPGVVISPKDAPALIDYAKTGNKPRATMTFQQTIVNTKPAPAVAFYTSRGPSPSCPTILKPDVMAPGSLVLAAWVPNRETARIGTGLSLSSDYTMVSGTSMACPHASGVAALLRGLVYDATPQDYVNLLCSMNFTKKQILTITRSNTYTCPKTSPDLNYPSFIALYSQNDNKSTTVVQKFQRTVTNVGDGTATYHATVIAPRGSKVTVSPTTLVFEKKYEKQSYTMSIKYKSDKDGKISFGWLTWIEDDGEHTVRSPIVVSPLVVNHR* 1687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 8645811 8672088 + Vvi18g748 Vvi18g748 780451

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g748 1686 CDD PA_subtilisin_like 762 877 - -
Vvi18g748 1686 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 643 701 IPR037045 -
Vvi18g748 1686 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 57 131 IPR037045 -
Vvi18g748 1686 PANTHER OS01G0868800 PROTEIN 650 704 - -
Vvi18g748 1686 PANTHER OS01G0868800 PROTEIN 707 1164 - -
Vvi18g748 1686 PANTHER OS01G0868800 PROTEIN 134 591 - -
Vvi18g748 1686 PANTHER OS01G0868800 PROTEIN 1210 1276 - -
Vvi18g748 1686 PANTHER OS01G0868800 PROTEIN 69 131 - -
Vvi18g748 1686 PANTHER OS01G0868800 PROTEIN 1533 1679 - -
Vvi18g748 1686 PANTHER OS01G0868800 PROTEIN 1276 1533 - -
Vvi18g748 1686 Pfam Subtilase family 1271 1542 IPR000209 GO:0006508|GO:0008236
Vvi18g748 1686 Pfam Subtilase family 715 988 IPR000209 GO:0006508|GO:0008236
Vvi18g748 1686 Pfam Subtilase family 141 417 IPR000209 GO:0006508|GO:0008236
Vvi18g748 1686 Gene3D - 185 311 - -
Vvi18g748 1686 Gene3D - 1326 1452 - -
Vvi18g748 1686 Gene3D - 760 884 - -
Vvi18g748 1686 ProSitePatterns Serine proteases, subtilase family, serine active site. 947 957 IPR023828 -
Vvi18g748 1686 SUPERFAMILY Subtilisin-like 133 449 IPR036852 GO:0004252|GO:0006508
Vvi18g748 1686 SUPERFAMILY Subtilisin-like 1274 1549 IPR036852 GO:0004252|GO:0006508
Vvi18g748 1686 CDD PA_subtilisin_like 1330 1445 - -
Vvi18g748 1686 ProSiteProfiles Serine proteases, subtilase domain profile. 546 1018 - -
Vvi18g748 1686 SUPERFAMILY Subtilisin-like 705 1022 IPR036852 GO:0004252|GO:0006508
Vvi18g748 1686 Pfam Peptidase inhibitor I9 69 131 IPR010259 -
Vvi18g748 1686 Pfam Peptidase inhibitor I9 1210 1276 IPR010259 -
Vvi18g748 1686 Gene3D Peptidase S8/S53 domain 702 1022 IPR036852 GO:0004252|GO:0006508
Vvi18g748 1686 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 69 131 IPR045051 -
Vvi18g748 1686 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1210 1276 IPR045051 -
Vvi18g748 1686 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1533 1679 IPR045051 -
Vvi18g748 1686 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 134 591 IPR045051 -
Vvi18g748 1686 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1276 1533 IPR045051 -
Vvi18g748 1686 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 707 1164 IPR045051 -
Vvi18g748 1686 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 650 704 IPR045051 -
Vvi18g748 1686 Pfam Fibronectin type-III domain 1574 1678 IPR041469 -
Vvi18g748 1686 Pfam Fibronectin type-III domain 489 590 IPR041469 -
Vvi18g748 1686 Pfam Fibronectin type-III domain 1062 1163 IPR041469 -
Vvi18g748 1686 Gene3D - 1035 1167 - -
Vvi18g748 1686 Gene3D - 462 593 - -
Vvi18g748 1686 Gene3D - 1552 1681 - -
Vvi18g748 1686 CDD PA_subtilisin_like 189 304 - -
Vvi18g748 1686 ProSitePatterns Serine proteases, subtilase family, serine active site. 1516 1526 IPR023828 -
Vvi18g748 1686 Gene3D Peptidase S8/S53 domain 1219 1551 IPR036852 GO:0004252|GO:0006508
Vvi18g748 1686 Gene3D Peptidase S8/S53 domain 132 448 IPR036852 GO:0004252|GO:0006508
Vvi18g748 1686 ProSiteProfiles Serine proteases, subtilase domain profile. 1 445 - -
Vvi18g748 1686 ProSitePatterns Serine proteases, subtilase family, serine active site. 374 384 IPR023828 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g748 - - - vri:117907234 976.467
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Vvi3g397 Vvi18g748 ECH
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g748 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0068988 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1