Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g788 ATGGATTCAGCCAAACCTGAATTAGCACGCGAAGTTCTTCCGCTTCTCCGAATACACAAAGATGGCAGCGTCGAGAGGCTTCGAGGCACCGAGGTTGTTCCGGCAGGCACTGATCCTCAAACAGGAGTTTCATCCAAAGATAAACTCCCTCTCCTTGTCTACTTCCACGGTGGTGGTTTCTATCTCTCCACACCCTTCGCTCCAAACTACCATAACTACCTCAATTCACTGGTTTCCCAAGCAAACGTTGTTGCTGTTTCTGTCAACTACAGAAAAGCTCCTGAACACCCTATTCCTGCTGCGTACGAAGACTCCTGGGCAGCACTACAGCTTCTGGGGGTTGCTCTGGTCCACCCCTTCTTCTGGGGGTCGACCCCTATTGGGTCGGAGGCGGTGGATCCGGAGAGAAAGGCTTGGGTGGACTCGGTGTGGCCGTTCGTGTGTCCGTCGATGCCGGACAGTGACGACCCACGATTGAACCCGGTGGCGGAGGGTGCACCAAGCTTGGTGGGGTTGGGTTGTGGTAGGGCGCTGGTTTGTGTGGCTGAGAAGGACGTGTTGAGAGATAGGGGTTTGGTTTACTACTCGGCTTTGGCTGGGAGCGGATGGATGGGTGTGGCGGAGATGTTCGAGACGGATGGTGAGGACCATGCCTTTCACCTTCATGATTTGGGGTGTGAAAAGGCCAGAGATTTGATCCAACGCTTGGCTGCTTTCTTGAATAGGGACATACATCTGGGGCGCAAGAGTCCATACCTAACTCCAAAAATGAATTCTCCACTGTTCACTTCGTGTAGAAATTATTCTCCTATAGGCTATAAATTGACTGTTAATCTTCGGAATACCATCGGCCTCTTGTTCTACGCTGTGGTACCAGTGGCATTTTTTAAGTCTTCTCAGTTTTTGATGGATTCAAGCAAGCCAAAAGTTATTCATGAGGTCGTTCCCTACCTCAGGGTATACGAAGACGGAACCATCGAGAGACTCCTCGGCACCGAGGTCACGCCCGCAGCTTTTGATCCTCAAACCGGCGTGGTATCCACAGACGTCGTCGTCGTACCTGAAACCGGTGTCTCCGCTAGACTCTACCGTCCCAAGCTCACACCCAACAACCAAAAACTTCCCCTCGTGGTGTACTTCCACGGTGGGGCATTTTGCATTTCATCAGCCGCTGATCCCAAATACCACCACTGTCTCAACACCCTAGTCGCAACGGCTAACGTCATCGCTGTGTCGGTGAATTACCGGCGAGCTCCTGAGCATCCACTTCCGGCTGCGTACGACGATTCCTGGGCGGTGCTTCAGTGGGTGGCTTCCCACTCGGTGGGAGGCGAAGGCAGTGAAGCCTGGGTCAGGGACGACGTTGACTTCGAGAGAGTGTTCCTGCTTGTTGGGATTGGTTTAATCCATCCCTATTTTTGGGGAGAAGACCAAATTGGGTCGGAGGCAAAGGATCCGGTGAGGAAGGCAATGGTGGATAAATGGTGGCAACTTGTTTGCCCGTCTGGAAGGGGAAACGATGATCCACTCATAAACCCGTTTGTGGATGGGGCCCCGAGTTTCAAAGACTTGGGGTGTGATAAGGTGCTGGTGTGTGTGGCAGAGAGAGACATACTGAGGGATAGAGGGCGGCTGTATTATGAAACATTGGTGAAGAGTGGGTGGGGAGGAACAGCGGAGATGGTGGAGACAGAAGGCGAGGACCACGTCTTCCATATATTTCAGGCCGACAGTGACAAGGCTCGAAGCTTGGTCAGAAGCTGGTGTTCTATACCCTGCAACTTATTGATAAAGTATATGATATTAAGCCTTGAAAACAATCCAATAATCTATTAA 1836 51.8 MDSAKPELAREVLPLLRIHKDGSVERLRGTEVVPAGTDPQTGVSSKDKLPLLVYFHGGGFYLSTPFAPNYHNYLNSLVSQANVVAVSVNYRKAPEHPIPAAYEDSWAALQLLGVALVHPFFWGSTPIGSEAVDPERKAWVDSVWPFVCPSMPDSDDPRLNPVAEGAPSLVGLGCGRALVCVAEKDVLRDRGLVYYSALAGSGWMGVAEMFETDGEDHAFHLHDLGCEKARDLIQRLAAFLNRDIHLGRKSPYLTPKMNSPLFTSCRNYSPIGYKLTVNLRNTIGLLFYAVVPVAFFKSSQFLMDSSKPKVIHEVVPYLRVYEDGTIERLLGTEVTPAAFDPQTGVVSTDVVVVPETGVSARLYRPKLTPNNQKLPLVVYFHGGAFCISSAADPKYHHCLNTLVATANVIAVSVNYRRAPEHPLPAAYDDSWAVLQWVASHSVGGEGSEAWVRDDVDFERVFLLVGIGLIHPYFWGEDQIGSEAKDPVRKAMVDKWWQLVCPSGRGNDDPLINPFVDGAPSFKDLGCDKVLVCVAERDILRDRGRLYYETLVKSGWGGTAEMVETEGEDHVFHIFQADSDKARSLVRSWCSIPCNLLIKYMILSLENNPIIY* 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9077711 9084453 + Vvi18g788 Vvi18g788 780491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g788 611 SUPERFAMILY alpha/beta-Hydrolases 26 242 IPR029058 -
Vvi18g788 611 Gene3D alpha/beta hydrolase 463 591 IPR029058 -
Vvi18g788 611 Gene3D alpha/beta hydrolase 112 249 IPR029058 -
Vvi18g788 611 Gene3D alpha/beta hydrolase 11 111 IPR029058 -
Vvi18g788 611 SUPERFAMILY alpha/beta-Hydrolases 308 586 IPR029058 -
Vvi18g788 611 PANTHER ARYLACETAMIDE DEACETYLASE 5 47 - -
Vvi18g788 611 PANTHER ARYLACETAMIDE DEACETYLASE 110 241 - -
Vvi18g788 611 PANTHER ARYLACETAMIDE DEACETYLASE 308 587 - -
Vvi18g788 611 PANTHER ARYLACETAMIDE DEACETYLASE 48 110 - -
Vvi18g788 611 PANTHER CARBOXYLESTERASE 2-RELATED 5 47 - -
Vvi18g788 611 PANTHER CARBOXYLESTERASE 2-RELATED 110 241 - -
Vvi18g788 611 PANTHER CARBOXYLESTERASE 2-RELATED 308 587 - -
Vvi18g788 611 PANTHER CARBOXYLESTERASE 2-RELATED 48 110 - -
Vvi18g788 611 Pfam alpha/beta hydrolase fold 52 112 IPR013094 GO:0016787
Vvi18g788 611 Pfam alpha/beta hydrolase fold 465 572 IPR013094 GO:0016787
Vvi18g788 611 Pfam alpha/beta hydrolase fold 136 220 IPR013094 GO:0016787
Vvi18g788 611 Pfam alpha/beta hydrolase fold 377 462 IPR013094 GO:0016787
Vvi18g788 611 Gene3D alpha/beta hydrolase 316 462 IPR029058 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g439 Vvi18g788 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g788 - K13258 vvi:100264240 665.225