Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g835 ATGGATATGATGGGTATTGAAGCTGTGCCTTTTGCCACTGCGGTGGTTTTGGGTGGTATTTCGTTGGTGGTACTGATCTTCATCAGAAGATTTGTTTCTAACCGGAAAAGAAGTGTTGAAGGGCTTCCACCTGTTCCCGATATCCCAGGGCTGCCGCTGATTGGGAATTTGCTGCAACTGAAAGAGAAGAAGCCACACAAGACTTTCGCAAGGTGGGCTGAGACTTATGGCCCAATCTTTTCCATCAGGACCGGAGCTTCTACTATGATCGTTCTGAATTCCTCCGAAGTTGCTAAAGAGGCAATGGTGACCAGGTTCTCATCCATCTCAACAAGGAAGTTATCAAATGCCTTGAAGATACTTACCTTCGATAAATGCATGGTTGCCACAAGTGACTACAATGACTTCCACAAGATGGTCAAAGGGTTTATACTCAGAAATGTTTTGGGAGCCCCCGCTCAGAAGCGACACCGATGCCACAGAGACACCTTGATTGAAAATATTTCGAAATACTTGCATGCCCATGTGAAGACCTCTCCTCTTGAACCAGTGGTTCTCAAAAAAATTTTCGAGTCTGAAATTTTCGGATTAGCGTTGAAACAAGCTTTGGGCAAGGACATTGAATCCATTTATGTGGAAGAGCTTGGCACCACTTTGTCAAGGGAGGAGATATTTGCGGTTTTGGTTGTTGATCCGATGGCAGGGGCCATTGAGGTGGACTGGAGAGATTTCTTCCCATATCTGAGTTGGATTCCTAATAAGAGCATGGAAATGAAAATCCAGAGAATGGATTTCCGCAGGGGAGCATTAATGAAGGCCCTTATCGGGGAGCAGAAGAAAAGGATTGGTTCAGGAGAGGAGAAGAATTGCTACATCGATTTCTTATTATCCGAAGCAACAACACTCACGGAGAAACAAATAGCCATGTTGATTTGGGAGACAATCATCGAGATATCAGATACTACTCTGGTCACATCTGAATGGGCCATGTATGAACTTGCTAAGGATCCAAACCGGCAGGAAATTTTATATCGGGAAATCCGCAAATTTTGTGGCTCCAATAAGGTTACAGAGGAAAACTTGTCTAAGCTTCCGTACTTAAATTCTGTTTTCCATGAGACTCTTAGGAAGTACAGTCCAGCTCCCATAGTCCCTGTTCGGTATGCGCATGAAGATACCCAATTGGGGGGATACCATATTCCTGCTGGAAGTCAGATCGCTATAAACATATATGGGTGCAACATGAACAAGAAACAATGGGAAAATCCTGAGGAGTGGAAGCCTGAAAGATTTCTGGATGAGAAATACGATCTAATGGATTTGCACAAGACGATGGCCTTTGGAGGAGGAAAGAGGGTGTGTGCAGGCGCTCTTCAGGCAATGCTAATAGCTTGCACATCAATTGGTAGGTTCGTGCAGGAGTTTGAGTGGAAACTGATGGGAGGGGAGGAAGAAAATGTGGATACCGTAGCACTCACCAGTCAGAAACTCCATCCCATGCAAGCGATCATAAAGGCAAGAGAGTGA 1527 44.79 MDMMGIEAVPFATAVVLGGISLVVLIFIRRFVSNRKRSVEGLPPVPDIPGLPLIGNLLQLKEKKPHKTFARWAETYGPIFSIRTGASTMIVLNSSEVAKEAMVTRFSSISTRKLSNALKILTFDKCMVATSDYNDFHKMVKGFILRNVLGAPAQKRHRCHRDTLIENISKYLHAHVKTSPLEPVVLKKIFESEIFGLALKQALGKDIESIYVEELGTTLSREEIFAVLVVDPMAGAIEVDWRDFFPYLSWIPNKSMEMKIQRMDFRRGALMKALIGEQKKRIGSGEEKNCYIDFLLSEATTLTEKQIAMLIWETIIEISDTTLVTSEWAMYELAKDPNRQEILYREIRKFCGSNKVTEENLSKLPYLNSVFHETLRKYSPAPIVPVRYAHEDTQLGGYHIPAGSQIAINIYGCNMNKKQWENPEEWKPERFLDEKYDLMDLHKTMAFGGGKRVCAGALQAMLIACTSIGRFVQEFEWKLMGGEEENVDTVALTSQKLHPMQAIIKARE* 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9625306 9628766 - Vvi18g835 Vvi18g835 780538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g835 508 SUPERFAMILY Cytochrome P450 44 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g835 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Vvi18g835 508 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 12 508 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Vvi18g835 508 Pfam Cytochrome P450 49 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g835 508 Gene3D Cytochrome P450 29 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g835 508 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g835 508 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g835 508 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g835 508 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g835 508 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g835 508 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g835 508 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g835 K04122 - vvi:100255742 1012.29