Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g842 ATGGATCCTGCTCTACATTTGCCTGCATTTTTTGTGTTTCTTTCTTTAATCTATGTCTTCTATGCAATGCTTGGAAGGAAAAAGATAATAAAAAGTAGTAAGAGCAGGGACGCTCCCGAACCAGGTGGTGCATGGCCAATTATTGGCCACCTCCATCTACTAGGAGGAGGTGATCAGCTTCTTTACCGTACACTTGGAGCCATGGCTGATAAGTATGGTCCGGCATTCAATATCCGCCTCGGCAGTCGCCGTGCTTTTGTGGTGAGTAGTTGGGAAGTAGCGAAGGAATGCTTCACCATTAATGACAAAGCACTTGCTACGCGTCCCACTACAGTAGCCGCAAAGCACATGGGCTACAACTATGCGGTATTTGGTTTTGCACCCTACAGCCCTTTCTGGCGTGAGATGCGGAAGATTGCAACACTTGAACTTCTTTCAAATCGTCGGCTTGAGATTCTAAAGCATGTTCGAACTTCAGAAGTTGACATGGGGATTAGGGAACTGTACGGTTTGTGGGTCAAAAACAGCTCCCGTCCATTGCTTGTTGAACTTAATCGATGGTTGGAAGATATGACACTTAACGTGATTGTTAGAATGGTGGCTGGAAAAAGATACTTTGGTGCTGCCGCTGCCTCCGACAGCAGTGAGGCAAGACGGTGCCAGAAAGCAATTAGCCAATTCTTTCGTCTAATCGGCATTTTTGTGGTTTCAGATGCACTTCCATTTCTATGGTGGCTGGATTTGCAGGGGCATGAGAGGGCAATGAAGACGACGGCCAAAGAATTGGATTCCATACTTGAAGGCTGGCTTGAGGAGCATCGCCAAAGAAGAGTTTCTAGTCTGATCAAGGCCGAGGGTGAGCAAGACTTCATTGACGTCATGTTGTCCCTTCAGGAGGAAGGGCGCCTCTCTGGTTTTCAGTATGATTCCGAAACAAGCATCAAGTCCACTTGCCTGGCACTAATCCTAGGTGGCAGTGACACCACAGCAGGCACACTGACGTGGGCCATTTCTTTACTCCTGAACAATCGCCACGCCTTGAAAAAGGCACAAGAAGAACTAGATCTGTGTGTTGGCATGGAAAGGCAAGTGGAAGAGTCAGACGTTAAAAACCTTGTGTATCTTCAAGCAATCATCAAGGAGACCCTTCGCCTCTACCCAGCAGGTCCCCTACTAGGACCCCGAGAGGCGTTGGACGATTGCACAGTCGCTGGCTACAATGTCCCTGCTGGCACTCGCTTAATAGTGAACATATGGAAGCTTCAAAGGGATCCAAGTGTTTGGACAAATCCTTGTGCTTTCCAACCGGAGAGATTTCTCAATGCTCATGCTGATGTTGATGTTAAAGGCCAACAATTTGAACTGATGCCTTTTGGGTCTGGCAGAAGATCGTGCCCTGGAGTTTCATTTGCACTCCAAGTCCTGCACTTGACCCTCGCACGACTCCTTCATGCATTTGAATTGTCAACGCCAGTGGATCAGCCGGTCGACATGACTGAGAGCTCGGGTTTAACCATTCCAAAAGCAACCCCATTAGAGGTCCTCTTGACTCCACGCCTGAACTCCAAGCTCTATGCTTTTTAA 1584 47.92 MDPALHLPAFFVFLSLIYVFYAMLGRKKIIKSSKSRDAPEPGGAWPIIGHLHLLGGGDQLLYRTLGAMADKYGPAFNIRLGSRRAFVVSSWEVAKECFTINDKALATRPTTVAAKHMGYNYAVFGFAPYSPFWREMRKIATLELLSNRRLEILKHVRTSEVDMGIRELYGLWVKNSSRPLLVELNRWLEDMTLNVIVRMVAGKRYFGAAAASDSSEARRCQKAISQFFRLIGIFVVSDALPFLWWLDLQGHERAMKTTAKELDSILEGWLEEHRQRRVSSLIKAEGEQDFIDVMLSLQEEGRLSGFQYDSETSIKSTCLALILGGSDTTAGTLTWAISLLLNNRHALKKAQEELDLCVGMERQVEESDVKNLVYLQAIIKETLRLYPAGPLLGPREALDDCTVAGYNVPAGTRLIVNIWKLQRDPSVWTNPCAFQPERFLNAHADVDVKGQQFELMPFGSGRRSCPGVSFALQVLHLTLARLLHAFELSTPVDQPVDMTESSGLTIPKATPLEVLLTPRLNSKLYAF* 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9699733 9701502 + Vvi18g842 Vvi18g842 780545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g842 527 PANTHER CYTOCHROME P450 CYP82D47-LIKE 9 522 - -
Vvi18g842 527 SUPERFAMILY Cytochrome P450 39 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vvi18g842 527 Pfam Cytochrome P450 39 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PANTHER STEROID 21-HYDROXYLASE-RELATED 9 522 - -
Vvi18g842 527 Gene3D Cytochrome P450 24 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS E-class P450 group I signature 376 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g842 527 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g512 Vvi18g842 ECH
Vvi3g508 Vvi18g842 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g842 K23136 - vvi:100247206 1030.78