Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g847 ATGGATGGTATTGCTCAGGAATGGTTAGAGGAACACCGACAGCGAAAAGATTCGGGTGAAGCTAATGGTAACCAGGACTTAATGGACGTGATGCTGTCCATTCTGGCTGGCACGGACCCTACCGGCTATGATGCCGATACAATCAACAAAGCCACATCCCTGATTTTGATTGCAGGAGGCAGTGACACTACATCTGTTACTCTAACATGGGCGATCTCACTTTTATTGAATAATCCATGTATGTTAAGAAAAGCCCAAGAAGAATTGGACACTCATGTTGGTAAAGGGAGATTGGTAAATGAAGTGGATTTAAGCAAGTTGGTCTACCTCCAAGCAATTGTTAAAGAGACATTGAGGTTATATCCCGCATTTCCACTTTCAGGACCACGCCAATTTAACCAAGATTCCATTTTAGGTGGTTACCGTATCCCAAAAGGCACTCGTCTTGTGTTGAACCTCACTAAGATCCAAAGAGACCCAAGTATATGGTTGAACCCAACAGAGTTTCAACCAGAAAGATTCCTCACTACTCACAAAGACATTGATATGAGGGTCAAAAATTTTGAGTTTACACCATTTGGTGGTGGAAGAAGAATTTGCCCTGTACTTTACAATTCGGATTGGGTTGCATCGAGCTTTGGTGGTAACTACTTGGGAGATGGCTAA 666 42.79 MDGIAQEWLEEHRQRKDSGEANGNQDLMDVMLSILAGTDPTGYDADTINKATSLILIAGGSDTTSVTLTWAISLLLNNPCMLRKAQEELDTHVGKGRLVNEVDLSKLVYLQAIVKETLRLYPAFPLSGPRQFNQDSILGGYRIPKGTRLVLNLTKIQRDPSIWLNPTEFQPERFLTTHKDIDMRVKNFEFTPFGGGRRICPVLYNSDWVASSFGGNYLGDG* 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9737858 9742306 + Vvi18g847 Vvi18g847 780550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g847 221 PRINTS P450 superfamily signature 191 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g847 221 PRINTS P450 superfamily signature 59 76 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g847 221 PRINTS P450 superfamily signature 112 123 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g847 221 PANTHER CYTOCHROME P450 82C3-RELATED 1 203 - -
Vvi18g847 221 PRINTS E-class P450 group I signature 190 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g847 221 PRINTS E-class P450 group I signature 48 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g847 221 PRINTS E-class P450 group I signature 152 176 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g847 221 PRINTS E-class P450 group I signature 68 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g847 221 PRINTS E-class P450 group I signature 111 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g847 221 SUPERFAMILY Cytochrome P450 2 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g847 221 Pfam Cytochrome P450 3 201 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g847 221 Gene3D Cytochrome P450 1 201 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g847 221 PANTHER P450, PUTATIVE-RELATED 1 203 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g511 Vvi18g847 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g847 - - vvi:100252231 409.068