Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g854 ATGGACGTGATGCTGTCCATTCTGGGTGCCACAGACCCTAATGGCTATGATGCTGATACCATCAACAAAGCCACATCCCTGATTTTGATTGCAGGAGGCACCGACACTACATCTGTTACTCTAACATGGGCAATCTCATTATTATTGAACAATCCACATGTGTTAAGAAAAGCTCAAGAAGAATTGGACACTCATGTTGGAAAAGAGAGACTAGTAAATGAAATGGATATAAGCAAGTTGGTCTACCTTCAAGCAATCGTTAAAGAGACATTGAGGTTATATCCAGCAGCCCCACTTTCAGGACAACGTCAATTTATCCAAGATTCCGTATTAGGCGGTTACCATATCCCAAAAGGCACTCGTCTTCTATTGAACCTCACCAAGATCCAAAGAGACCCAAGAGTATGGTTGAACCCAACAAAGTTCCAACCAAGTAGATTCCTCACCACCTACAAAGATGTTGATGTTAAGGACCAAAATTACGACTTCTCCGATTTCATTGTAAAAAAGGTCTACGTTCAAACTCTGGTAAGAGGAGCGTGCACCACTTTAAACTCTTGGTGCGCCTTTATGGAAAACATCTTCACAGCATGTTGCAAATCTGATTTTGAGGAAAATATTTGGCCAATTAATAATTATCCATCAACATTTCCTAAAGTTGGCTTTTTTCATGGAGTCCAATCACTTACAACACAATTAATTGCCGCATCCATATTTAAAAATTGTGGTGTAGGTGGCATATGGTATGAAACGGGTACAAATGTTTCCTGTAGGTTGTCATTAGAGATATTAAATTGGGTACCATGTGGAGAGGCAACTAGTGATGTGTTTTCAACCTCAAACTCAACCTCAGGATTATTAGACCTATCACCAACTTCAAGGTTCAAAAATCTTGTGCTTTCACATTCCACAACTTGTTGGACCATCACCAAATCAATATTTTCTGTTTGA 951 39.54 MDVMLSILGATDPNGYDADTINKATSLILIAGGTDTTSVTLTWAISLLLNNPHVLRKAQEELDTHVGKERLVNEMDISKLVYLQAIVKETLRLYPAAPLSGQRQFIQDSVLGGYHIPKGTRLLLNLTKIQRDPRVWLNPTKFQPSRFLTTYKDVDVKDQNYDFSDFIVKKVYVQTLVRGACTTLNSWCAFMENIFTACCKSDFEENIWPINNYPSTFPKVGFFHGVQSLTTQLIAASIFKNCGVGGIWYETGTNVSCRLSLEILNWVPCGEATSDVFSTSNSTSGLLDLSPTSRFKNLVLSHSTTCWTITKSIFSV* 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9804912 9814683 + Vvi18g854 Vvi18g854 780557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g854 316 PANTHER CYTOCHROME P450 82C3-RELATED 1 166 - -
Vvi18g854 316 Gene3D Cytochrome P450 1 167 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g854 316 PRINTS P450 superfamily signature 85 96 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g854 316 PRINTS P450 superfamily signature 32 49 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g854 316 PRINTS E-class P450 group I signature 125 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g854 316 PRINTS E-class P450 group I signature 84 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g854 316 PRINTS E-class P450 group I signature 41 67 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g854 316 PRINTS E-class P450 group I signature 21 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g854 316 PANTHER P450, PUTATIVE-RELATED 1 166 - -
Vvi18g854 316 SUPERFAMILY Cytochrome P450 16 153 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g854 316 Pfam Cytochrome P450 23 152 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g519 Vvi18g854 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g854 - - vvi:100245555 315.849