Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g857 ATGGTGGCAGGGAAGCGTTATTTCAGTGCTTCAGATGCAAGTGAAAATAAACAGGCGCAGAGGTGCCGGAGAGTGTTCAGGGAATTCTGTCATTTGTCAGGGCTCTTTGCGGTGGCGGACGCTATTCCTTTTCTTGGATGGCTAGACTTGGGGAGACATGAGAAGACCCTAAAGAAGACAGCAAAAGAAATGGACAGTATTGCTCAAGAATGGTTAGAGGAGCACCGTCGGAGGAAAGACTCCGGTGAAGTTAATAGTACGCAAGACTTCATGGATGTGATGCTGTCAGTTCTTGATAGCAAAAACCTTGGTGATTACGATGCTGATACCGTCAATAAAGCCACATGCCTGGCTCTAATTGTAGGAGGTAGTGACACAACAGTTGTCACTTTAACTTGGGCGCTCTCTCTTCTATTAAACAATCGTGACACCTTAAAAAAGGCACAAGAAGAATTAGATATTCAAGTTGGCAAGGAAAGATTAGTGAATGAACAAGATATCAGTAAATTGGTCTATCTCCAAGCCATTGTTAAAGAGACATTACGATTATATCCGCCAGCAGCACTTGGAGGACCACGTCAATTCACTGAGGACTGCACCTTGGGTGGTTACCATGTCTCCAAAGGCACCCGATTAATATTGAATCTTTCCAAAATCCAAAAGGATCCAAGAATTTGGATGACATGTCCAGGAATAGCTTTCGCTCTTCAAATGCTACATTTAACATTGGCCAATTTCTTACAGGCATTCGACTTTTCAACTCCATCAAATGCACAAGTTGATATGTGCGAGAGCCTTGGACTTACAAACATGAAATCTACCCCACTTGAAGTTCTCATTTCTCCACGCATGTCTTTGTTATATCGGTATACGACGACAAAAAGGCTCAGAGAAGCGTTTAGCGAGTTTGATGGGGCCCAGATTGTCGTAAAGTTTAACAAAGCATGGGGGTCTCTTTGTGACTATGCAATTAAAAAGAACGAACAACCTCTGACTTGGAGGGAAGAAAGCCTCGCCCAAATAAAGGAATGGGTCAATGCCAAGAAAATTCATAGGAAGACCGATACAGAAACAAAACTAAAAAAGATTGATAGGATGTCAAACAAAGAGGATAGGTTCCAAGTTTATGAGGATTTAGTATTTGCGCAAAAGTTCCTATCTTTCTATTCCTCGATCAAGTCTGTTTTCGATGATTTGAAAATCTTAAAAGACATCAAGAGAGAACACCTTCATAAGGTTACAGATAGACTTCTTCCGTTCAATCAGATGGGACTCTTTATGCTTAAGCTGGAAAAACACCGACAGATCGATCTAACCATGGCGGTGCCACACTCCAGCAGTCTTCTTCAATACCTAAATATTACCACGATCGGAGTGCTTGGCATACTTTTTCTTTCATACTATCTATTAGTACGGAGATCCAGAGCTGGTAAGAGAAGAATAGCACCTGAAGCAGCTGGTGCATGGCCAATAATCGGTCACCTACACCTCTTAGGTGGGTCACAGCTCCCTCATGTAACCTTGGGAACCATGGCCGACAAGTACGGACCGATCTTCACTATCAGGCTCGGGGTGCATCGAGCATTGGTGGTGAGTAGTAGGGAGGTGGCCAAAGAATGTTTCACCACCAATGACTCGGCTGTATCCGGCCGTCCCAAACTGGTAGCCCCAGAACATCTGGGTTACAACTACGCCATGTTCGCTTTCTCCCCTTACGATGCTTACTGGCGTGAAGTGCGAAAGATAGTCAATACAGAGCTACTTTCCAACCGCCGCCTAGAGTTGCTGAAGGACGTTCGAGCCTCAGAGGTGGAGACATCCATAAAAGAACTGTACAAGCTCTGGGCGGAAAAGAAGAACGAATTGGGGCATGAGGAAGAGGCCCGGCGGTGCCAGAAGGCCATTAGGGAATTCTTTCGTTTGCTGGGGCTCTTTGTGGTGAAGGATGGGATTCCTTCCCTCGGATGGTTGGACTTGGGAGGACACGAGAAGGCCATGAAGAAGACTGCAAAAGAAATAGACAGCATTGCTCAAGAATGGTTAGAGGAGCACCGTCGGAGGAAAGATTGGGGTGAAGATAATGGTATGCATGATTTCATGGATGTGTTGCTCTCAGTCCTCGACGGCAAAGCCCTTCCTGAGTACGATGCCGATACCATCAACAAAGCCACTTCCATGGCTCTGATTTCAGGAGGTACTGACACCATGACTGTTACCCTAACATGGGCACTTTCATTGATATTAAACAATCGTGAAACCTTGAAGAAGGCTAAAGAGGAATTGGATACCCATGTTGGCAAAGAAAGATTAGTTAATGCATCGGATATTAGCAAGTTGGTCTATCTTCAAGCAATTGTTAAGGAGACATTACGACTACGTCCTCCCGGACCACTGTCAGGACCACGCCAATTCACCGAAGACTGCATTATTGGTGGTTACCATGTCCCTAAAGGCACCCGACTAGTGTTGAACCTCTCAAAGCTCCATAGGGATCCAAGTGTATGGTTAGACCCTGAAGAGTTTCAGCCAGAGAGATTTCTCACCACCCACAGAGACGTTGATGCTAGGGGTCAGCATTTCCAACTACTGCCATTTGGTGCAGGTAGAAGATCATGCCCTGGAATAACTTTTGCCCTTCAAATGCTACATTTGGCACTGGCTAGTTTCTTACATGGATTTGAGGTCTCAACTCCATCAAATGCACCTGTCGATATGAGCGAGATTCCTGGACTAACAAACATTAAGTCCACCCCACTTGAAATTCTCATAGCTCCTCGCCTGCCTTATAATTCTTATAAATGA 2802 44.97 MVAGKRYFSASDASENKQAQRCRRVFREFCHLSGLFAVADAIPFLGWLDLGRHEKTLKKTAKEMDSIAQEWLEEHRRRKDSGEVNSTQDFMDVMLSVLDSKNLGDYDADTVNKATCLALIVGGSDTTVVTLTWALSLLLNNRDTLKKAQEELDIQVGKERLVNEQDISKLVYLQAIVKETLRLYPPAALGGPRQFTEDCTLGGYHVSKGTRLILNLSKIQKDPRIWMTCPGIAFALQMLHLTLANFLQAFDFSTPSNAQVDMCESLGLTNMKSTPLEVLISPRMSLLYRYTTTKRLREAFSEFDGAQIVVKFNKAWGSLCDYAIKKNEQPLTWREESLAQIKEWVNAKKIHRKTDTETKLKKIDRMSNKEDRFQVYEDLVFAQKFLSFYSSIKSVFDDLKILKDIKREHLHKVTDRLLPFNQMGLFMLKLEKHRQIDLTMAVPHSSSLLQYLNITTIGVLGILFLSYYLLVRRSRAGKRRIAPEAAGAWPIIGHLHLLGGSQLPHVTLGTMADKYGPIFTIRLGVHRALVVSSREVAKECFTTNDSAVSGRPKLVAPEHLGYNYAMFAFSPYDAYWREVRKIVNTELLSNRRLELLKDVRASEVETSIKELYKLWAEKKNELGHEEEARRCQKAIREFFRLLGLFVVKDGIPSLGWLDLGGHEKAMKKTAKEIDSIAQEWLEEHRRRKDWGEDNGMHDFMDVLLSVLDGKALPEYDADTINKATSMALISGGTDTMTVTLTWALSLILNNRETLKKAKEELDTHVGKERLVNASDISKLVYLQAIVKETLRLRPPGPLSGPRQFTEDCIIGGYHVPKGTRLVLNLSKLHRDPSVWLDPEEFQPERFLTTHRDVDARGQHFQLLPFGAGRRSCPGITFALQMLHLALASFLHGFEVSTPSNAPVDMSEIPGLTNIKSTPLEILIAPRLPYNSYK* 934
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9828011 9838662 + Vvi18g857 Vvi18g857 780560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g857 933 PANTHER CYTOCHROME P450 82C3-RELATED 1 227 - -
Vvi18g857 933 PANTHER CYTOCHROME P450 82C3-RELATED 228 285 - -
Vvi18g857 933 PANTHER CYTOCHROME P450 82C3-RELATED 623 932 - -
Vvi18g857 933 PANTHER CYTOCHROME P450 82C3-RELATED 456 624 - -
Vvi18g857 933 SUPERFAMILY Cytochrome P450 6 283 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 SUPERFAMILY Cytochrome P450 488 926 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PRINTS E-class P450 group I signature 512 531 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PRINTS E-class P450 group I signature 536 557 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PRINTS E-class P450 group I signature 740 766 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PRINTS E-class P450 group I signature 783 801 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PRINTS E-class P450 group I signature 824 848 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PRINTS E-class P450 group I signature 862 872 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PRINTS E-class P450 group I signature 872 895 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PRINTS P450 superfamily signature 731 748 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PRINTS P450 superfamily signature 784 795 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PRINTS P450 superfamily signature 863 872 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PRINTS P450 superfamily signature 872 883 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 Pfam Cytochrome P450 17 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 Pfam Cytochrome P450 625 911 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 Pfam Cytochrome P450 487 615 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 PANTHER P450, PUTATIVE-RELATED 1 227 - -
Vvi18g857 933 PANTHER P450, PUTATIVE-RELATED 456 624 - -
Vvi18g857 933 PANTHER P450, PUTATIVE-RELATED 228 285 - -
Vvi18g857 933 PANTHER P450, PUTATIVE-RELATED 623 932 - -
Vvi18g857 933 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 865 874 IPR017972 GO:0005506|GO:0016705
Vvi18g857 933 Gene3D Cytochrome P450 472 924 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g857 933 Gene3D Cytochrome P450 1 285 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g857 - K23136 vvi:100266133 969.533