Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g863 ATGGCGTCCCCTTCTCTAACTTTCCCTTCCCTGCAACTACAATTCCCAACACACACAAAATCATCTAAGCCATCCAATCATAAGCTCATTGTTCGCCCGATATTTGCCTCTGTTTCTGAGAAACCATCGGTACCGGTTTCTCAGTCTCAGGTGACGCCCCCCGGTCCAATCAGGAAAATTCCCGGAGATTATGGTCTCCCTTTCATCGGTCCCATAAAAGATCGTCTTGATTATTTCTATAATCAAGGCAGAGAAGAGTTCTTCAGGTCCAGAGCCCAGAAACACCAGTCAACCGTGTTCCGGTCCAACATGCCACCCGGCCCTTTCATCTCCTCCAACTCCAAAGTCATCGTTTTACTGGATGGGAAGAGTTTTCCTGTACTCTTTGACGTTTCCAAAGTTGAAAAAAAGGACGTTTTCACCGGAACTTTCATGCCCTCCACCGAATTCACCGGCGGATTCAGAGTTCTTTCCTATCTCGATCCATCCGAGCCCGATCACACCAAACTCAAGCGCCTCCTCTTCTTCCTCCTCCAGTCCAGCCGCGACAGGGTCATCCCAGAGTTCCATTCCTGCTTCTCCGAGCTCTCCGAGACCCTTGAAAGCGAACTCGCAGCAAAAGGCAAAGCCAGTTTCGCCGACCCTAACGATCAGGCATCCTTCAACTTTCTTGCTCGCGCTCTCTACGGCACCAAGCCGGCTGATACCAAACTGGGTACTGACGGGCCTGGCTTAATCACGACATGGGTTGTCTTCCAGTTGAGTCCCATCCTCACTCTAGGCCTACCCAAGTTTATAGAAGAACCCCTTATCCACACTTTTCCACTCCCGGCATTTCTGGCTAAATCAAGTTACCAGAAGCTCTATGACTTCTTCTACGACGCGTCAACTCATGTTCTGGACGAAGGTGAGAAGATGGGGATATCAAGAGAGGAAGCTTGCCACAACCTCCTTTTCGCCACGTGCTTTAATTCCTTCGGAGGGATGAAAATCATCTTTCCAACAATTCTCAAATGGGTCGGTCGAGGAGGAGTGAAACTGCACACCCAATTAGCCCAGGAGATTAGATCTGTCGTCAAATCCAACGGCGGAAAAGTGACCATGGCGTCCATGGAGCAGATGCCGCTGATGAAGTCTACTGTATACGAAGCCTTCCGGATCGAACCCCCTGTCGCATTGCAGTACGGCAAGGCGAAGCAGGATCTGAAGCTGCTGAAGCACGTGCTCTGGTCAAACGGACCTGAAACCGAGAATCCAACCTTGGGGAATAAGCAGTGCGCAGGTAAAGACTTCGTGGTGCTGGCCGCCAGGCTATTTGTGGTGGAGCTGTTCCTGCGTTACGATTCCTTTGACATCGAGGTTGGCACGTCGCTGTTGGGTTCAGCCATCAATCTAACCTCCCTAAAGCGAGCCAGTTTTTGA 1422 50.63 MASPSLTFPSLQLQFPTHTKSSKPSNHKLIVRPIFASVSEKPSVPVSQSQVTPPGPIRKIPGDYGLPFIGPIKDRLDYFYNQGREEFFRSRAQKHQSTVFRSNMPPGPFISSNSKVIVLLDGKSFPVLFDVSKVEKKDVFTGTFMPSTEFTGGFRVLSYLDPSEPDHTKLKRLLFFLLQSSRDRVIPEFHSCFSELSETLESELAAKGKASFADPNDQASFNFLARALYGTKPADTKLGTDGPGLITTWVVFQLSPILTLGLPKFIEEPLIHTFPLPAFLAKSSYQKLYDFFYDASTHVLDEGEKMGISREEACHNLLFATCFNSFGGMKIIFPTILKWVGRGGVKLHTQLAQEIRSVVKSNGGKVTMASMEQMPLMKSTVYEAFRIEPPVALQYGKAKQDLKLLKHVLWSNGPETENPTLGNKQCAGKDFVVLAARLFVVELFLRYDSFDIEVGTSLLGSAINLTSLKRASF* 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 9911108 9912876 - Vvi18g863 Vvi18g863 780566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g863 473 Gene3D Cytochrome P450 56 404 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g863 473 SUPERFAMILY Cytochrome P450 56 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g863 473 Gene3D Cytochrome P450 405 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g863 473 PANTHER CYTOCHROME P450 26 39 402 - -
Vvi18g863 473 PANTHER CYTOCHROME P450 26 404 471 - -
Vvi18g863 473 Pfam Cytochrome P450 349 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g863 473 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 404 471 - -
Vvi18g863 473 PANTHER ALLENE OXIDE SYNTHASE 1, CHLOROPLASTIC-LIKE 39 402 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Vvi3g531 Vvi18g863 ECH
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g863 K01723 - vvi:100267750 910.983