Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g912 ATGCACCTTGTCTCCATGGCTTTAAGAAGTGTTTATATTCCCGGCTTCAGATTTTTGCCCACTAAGAAGAACAGAGAAAGATGGAGACTTGAGGAGGAAACTCAAAAGTCCATTCGGATGTTAATTGAGACTAATAGCAAAGCAAAGGAAAATTCAGAAAATTTAATTAGTCTATTAATGTCTGCCAACAAGAATCAGCAGGGAGGAGAAGAGATGTTTGGAGTGGAGGATGTTATAGGCGAATGCAAGACATTCTACTTTGCAGGAAAGGAAACGACTGCTAATCTTTTGACTTGGGCTCTTCTTCTTCTAGCTTTTCATCAAGAATGGCAAGACAAAGCACGGGAAGAAGTGGTTCGCATCTATGGACACAATGCGCCTTCTGCAGCAGAGAATTTAAACGACCTTAAAATTGTAAGCATGATACTCAATGAAACACTTCGACTCTACCCCCCTGTTGTGGCGATGACAAGGAAAGTATCGAAAAATGTCAAGCTAGGGAGTCTCGATATTCCTTCAAACACGCAACTGTACTTGGTCATGACTGCTGTTCATCACGACCCTAAAATATGGGGTGAAGATGCTAATGATTTCAATCCACTGAGATTTAAGGAACCTCGGAAGCATCTAGCCTCGTTTTTCCCCTTTGGGTTGGGCCCCAGGATCTGTGTAGGTCAAACTCTTGCAGTGGTTGAGGCAAAAATTGCCCTCTCTATGATCGTCCAACATTATTCTTTCGAGTTATCATCAACATATGTTCATGCCCCAATGCTGTTTATCACCCTGCAGCCTCAGTATGGTGCTCACATTCTCTTTAGAAGGATTTTAAGCTGA 834 42.21 MHLVSMALRSVYIPGFRFLPTKKNRERWRLEEETQKSIRMLIETNSKAKENSENLISLLMSANKNQQGGEEMFGVEDVIGECKTFYFAGKETTANLLTWALLLLAFHQEWQDKAREEVVRIYGHNAPSAAENLNDLKIVSMILNETLRLYPPVVAMTRKVSKNVKLGSLDIPSNTQLYLVMTAVHHDPKIWGEDANDFNPLRFKEPRKHLASFFPFGLGPRICVGQTLAVVEAKIALSMIVQHYSFELSSTYVHAPMLFITLQPQYGAHILFRRILS* 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
18 10356444 10357646 - Vvi18g912 Vvi18g912 780615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g912 277 PRINTS E-class P450 group I signature 77 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g912 277 PRINTS E-class P450 group I signature 97 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g912 277 PRINTS E-class P450 group I signature 213 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g912 277 PRINTS E-class P450 group I signature 223 246 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g912 277 PRINTS P450 superfamily signature 88 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g912 277 PRINTS P450 superfamily signature 141 152 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g912 277 PRINTS P450 superfamily signature 214 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g912 277 PRINTS P450 superfamily signature 223 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g912 277 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 1 270 - -
Vvi18g912 277 Pfam Cytochrome P450 14 252 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g912 277 Gene3D Cytochrome P450 2 273 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi18g912 277 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 216 225 IPR017972 GO:0005506|GO:0016705
Vvi18g912 277 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 270 - -
Vvi18g912 277 SUPERFAMILY Cytochrome P450 8 273 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g912 - - vvi:100257474 536.954